Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00076 ATGGATTTCCAACCTTCCTTCCTGGTTATTACCCCATTCCTCTTGTTGCTGCTTTGGTTTGCAAGGATTTACAAGAACAAAATCATAATGAAGAGTGTGGTTCATAAGCTTCCCCCAGGACCATGGAAGTTGCCTCTAATAGGAAACCTTCACCAACTGGCAAGGGCACACACACTTCCACACCATACCCTTCAAAATCTATCACACAAATATGGACCTCTGATGCACCTTCAACTGGGAGAAATTTCTGCTGTGATTGTGTCATCCCCTGACATGGCAAAGGAGATAATGAAGACACATGATCTTAATTTTGTGCAGAGGCCAGAATTACTTTGTCCTAAAATCCTGGCCTACGGATCAACCGATATTGCCTTTGCTCCGTACGGTGATTACTGGAGACAGATGAGGAAAATATGTACACTAGAGCTTCTTAGTGCCAAAAGGGTTCAGTCTTTCTCCTTCATTCGTGAAGAAGAGGTGGCTAAGCTCATACAGTCCATTCAATTGTGTGCATGTGCAGGTTCACAAGTCAATGTTTCTAAGAGTGTTTTTTCTTTTCTAAGCACCCTTGTTTCTAGGACAGCCTTTGGTAAACAATCTGAGAACGAGGATGAACTTTTGTGTTTGCTCAAGAAAGGAGCGGAACTCACGGGAGGGTTTGACCTTGCTGATCTGTTCCCTTCATTGAAAGCTGTTCATTTCATAACTCGGATGAAAGCAAAGCTGGAGGACATGCATAAAGAGCTGGACAAGATTTTAGAAAACATTATCAACGAGCATCAATCAAAGCATGGCAAGGGAGAAGCAGAAGAAAATCTGGTAGATGTTCTTTTGCGCGTGCAGCAAAGTGCCACCCTGGAGGTTCCAGTCACAATCGACAACATCAAAGCCGTTATATGGGACATATTCGGGGCAGGGACGGATACTTCAGCAACAGTACTAGAGTGGGCTATGTCAGAGCTGTTGAAAAACCCAGCAATGATGAAAAAGGCACAGGTTGAAATACGAGAAGCTTTTAGGGGAAATAAAAGAATTGGTGAGAGTGATGTATATGAACTAAACTACTTGAAGTGGGTGATCAAAGAAACCTTAAGGTTACATCCACCTGTTCCTCTGTTGCTCCCAAGAGAATGCAGGGATTCATGCAAGATAGATGGATATGCTATACCTGCGAAGACTAAAGTGATAATAAATGCATGGGCACTTGGAAGAGATCCCAAGCATTGGTACGAGGCCGAGAAGTTTATACCAGAGAGATTTGATGGCACTGGTTTGGATTTTAAAGGGAATAATTTTGAGTACATTCCTTTCGGTGCAGGGAGGAGAATGTGTCCTGGCATTTTACTTGGCTTAGCCAATGTTGAGCTTCCTCTGGCTGCATTGCTCTATCACTTTGACTGGAAACTACCCAATGCAATGAAACCACAGGACTTTGATATGACAGAAGCCTTTGGAGCTACAGTAGGAAGAAAAAACAACCTATATCTCGTACCAAGTCTGCATGACTCTTCCCTTGATCATGTCATGGCCACATCACCCTCTTAA 1545 0.4317 MDFQPSFLVITPFLLLLLWFARIYKNKIIMKSVVHKLPPGPWKLPLIGNLHQLARAHTLPHHTLQNLSHKYGPLMHLQLGEISAVIVSSPDMAKEIMKTHDLNFVQRPELLCPKILAYGSTDIAFAPYGDYWRQMRKICTLELLSAKRVQSFSFIREEEVAKLIQSIQLCACAGSQVNVSKSVFSFLSTLVSRTAFGKQSENEDELLCLLKKGAELTGGFDLADLFPSLKAVHFITRMKAKLEDMHKELDKILENIINEHQSKHGKGEAEENLVDVLLRVQQSATLEVPVTIDNIKAVIWDIFGAGTDTSATVLEWAMSELLKNPAMMKKAQVEIREAFRGNKRIGESDVYELNYLKWVIKETLRLHPPVPLLLPRECRDSCKIDGYAIPAKTKVIINAWALGRDPKHWYEAEKFIPERFDGTGLDFKGNNFEYIPFGAGRRMCPGILLGLANVELPLAALLYHFDWKLPNAMKPQDFDMTEAFGATVGRKNNLYLVPSLHDSSLDHVMATSPS* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00076 514 Pfam Cytochrome P450 38 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00076 514 SUPERFAMILY Cytochrome P450 38 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00076 514 Gene3D Cytochrome P450 31 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00076 514 PANTHER OS08G0105600 PROTEIN 62 502 - -
Lapu3g00076 514 FunFam Cytochrome P450 71D8 30 498 - -
Lapu3g00076 514 Coils Coil 235 259 - -
Lapu3g00076 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Lapu3g00076 514 CDD CYP71-like 70 494 - -
Lapu3g00076 514 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00076 514 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00076 514 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00076 514 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00076 514 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00076 514 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00076 514 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00076 514 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00076 514 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00076 514 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00076 514 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00076 514 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00076 Lapu-Chr3 1079450 1081130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00076 35 499 Cytochrome P450 AT3G26300 44.492 2.35e-141 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00076 - K15472 gmx:100794503 868.996