Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu3g00062 | ATGCATGCAGTTACTGACTTGCTAGTTACAAGTGGCATTCATGCATTCTGCAGCATCATATATCAGAATACAAGGATCTGTCTCCACACTACAAGTCTTCTTTTTCCTTCCTTCCCGCCGGCCAAGACAAGGCTCGGTGTGTTGGACGGACTAATATATGTACATGCATTATGCAGTTCCAATCCAACCATAGATATTTTTGAACAAGCCCTAAGTCCTATAACTTTTCAGACAGGAGACAACAACCACACCGCAGAGGAGAGCAACGAATGCACCGTGAGGGAGCAAGACCGTTTCATGCCCATCGCAAATGTGATTAGGATCATGCGGAAGATTCTTCCCCCACACGCCAAGATCTCAGATGATGCCAAAGAAACAATTCAAGAGTGTGTGTCTGAGTACATCAGCTTTATCACCGGAGAGGCAAACGAGCGTTGCCAGAGGGAACAACGCAAGACCATAACTGCAGAGGATGTGCTTTGGGCCATGAGCAAGCTTGGATTTGATGATTACATGGAACCACTGACCATGTACCTTCACAGGTATCGTGAGCTTGAGGGTGACCGAACCTCCATGAGGGGTGAACCACTGGGTAAGAGGACCATTGAATACGCCCCTATGGGTGTTGGTGTTGCTACTGCTTTTGTGCCGCCACCGTTTCACCCCAACGGATACTATGGTGCTGCCATGGGGACTTATGTAGCGCCACCAAATGCTGCGTCCTCTCATCACCATGGAATGCCTAATGCTGAACCGAATCCTCGCTCCATGTGA | 774 | 0.4858 | MHAVTDLLVTSGIHAFCSIIYQNTRICLHTTSLLFPSFPPAKTRLGVLDGLIYVHALCSSNPTIDIFEQALSPITFQTGDNNHTAEESNECTVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYMEPLTMYLHRYRELEGDRTSMRGEPLGKRTIEYAPMGVGVATAFVPPPFHPNGYYGAAMGTYVAPPNAASSHHHGMPNAEPNPRSM* | 258 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu3g00062 | 257 | SUPERFAMILY | Histone-fold | 96 | 194 | IPR009072 | GO:0046982 | |
Lapu3g00062 | 257 | Gene3D | Histone, subunit A | 86 | 203 | IPR009072 | GO:0046982 | |
Lapu3g00062 | 257 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 99 | 163 | IPR003958 | - | |
Lapu3g00062 | 257 | ProSitePatterns | NF-YB/HAP3 subunit signature. | 130 | 146 | IPR003956 | GO:0005634|GO:0006355|GO:0043565 | |
Lapu3g00062 | 257 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 80 | 227 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 | |
Lapu3g00062 | 257 | PRINTS | CCAAT-binding transcription factor subunit A signature | 146 | 164 | - | - | |
Lapu3g00062 | 257 | PRINTS | CCAAT-binding transcription factor subunit A signature | 127 | 145 | - | - | |
Lapu3g00062 | 257 | PRINTS | CCAAT-binding transcription factor subunit A signature | 165 | 183 | - | - | |
Lapu3g00062 | 257 | FunFam | Nuclear transcription factor Y subunit B-6 | 88 | 204 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu3g00062 | Lapu-Chr3 | 979096 | 980596 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu3g00062 | 68 | 189 | CCAAT-HAP3 Transcription Factor Family | AT5G47670 | 81.301 | 7.00e-67 | 205 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YB | Lapu3g00062 | CBFD_NFYB_HMF | 8.3e-26 | CL0012 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu3g00062 | K08065 | - | gmx:100194424 | 301.212 |