Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00056 ATGGAGATGGAGTACCCCGAAAACTACTGCTATAGAAGCAGCAGCGTGTGCGAGATAGTGGAGGAGGAAGATGACCACAACCAAACTCAACACCGTGTTGGGCATGTTGGGCCTATAGCCACCATTCACAGGGAAGAAGAAGAAGAAGAAGAAGAAGACTGTGTTTATGTTGCAGTGGGTAAGAGCGACACAAGCATGCACGCTCTCTCATGGACACTTAACAACTTGGTTACTCAATCTACCATCATTTATCTCATTCATGTATTCCCTCAGATCAAACACATTCCAAATCCATTGGGAATAGGAATGATTCCAAGGAATCAAGTGAGTGGTGAGCAGGTGGAGAGTTATATTGAGCAAGAAAGAGGCAAGAGGAGAGAGCTCCTTCAGAAATTCCTACAATCATGTTCTACTTCCAAGGTTAAGGTGGACACCATCCTGATTGAGAGTGACATAGTTGCAAAGGCTATCCTCGACCTCATTCCCATTCTTCGAATACAAAGTCTAGTGATTGGAGCCAACAAATTCCATCTAAGAAAATCAAAATCAAGGAAAGGGAACAGTGTTGCTGATCAGATACTGCAGAAGTCACCAGAAAGTTGCAAGGTGAGAATTATATGTGAAGGGAAGGAAGTAAACGAGCATATGATCATGTCACCCCCTCCTCTCACCTCTGCTAACGATTCTTCCATAACTAGCCAAAAGAAAGAAGATGATCATGATTCGGTTTCATGCATTTGTTTCATACCCAAGTTTAAATGA 762 0.4278 MEMEYPENYCYRSSSVCEIVEEEDDHNQTQHRVGHVGPIATIHREEEEEEEEDCVYVAVGKSDTSMHALSWTLNNLVTQSTIIYLIHVFPQIKHIPNPLGIGMIPRNQVSGEQVESYIEQERGKRRELLQKFLQSCSTSKVKVDTILIESDIVAKAILDLIPILRIQSLVIGANKFHLRKSKSRKGNSVADQILQKSPESCKVRIICEGKEVNEHMIMSPPPLTSANDSSITSQKKEDDHDSVSCICFIPKFK* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00056 253 Gene3D HUPs 46 216 IPR014729 -
Lapu3g00056 253 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 56 198 - -
Lapu3g00056 253 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 9 252 - -
Lapu3g00056 253 MobiDBLite consensus disorder prediction 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00056 Lapu-Chr3 921204 922418 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00056 58 210 Plant U-box Gene Family AT5G57035 30.323 2.56e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00056 - - vra:106768035 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00056 3 921204 922418 Lapu6g01702 6 16887132 16888881 PCT