LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu3g00055	ATGATGGGATCAACAAGGTCATGGGAAAAGGAGCAGGATGAGTGCATGGCCTGCGATACCCCTGAAGAAAGCTTCAGTTGCTTTAAAAGTGGTTTTATGGGGTTCAAGAGAAACCAAGTGGTGGATTGCAGTCTTAGCCGCCGCCTCAGCAGCAGTAGCAGCAGTAGCAGCAGCGAGATAGGAGATTCAGATTCGGAGGAGTTGTTTGAGATCAATCTGAAGGAGCCTTTGGTTTTGGATACCATTAGAGAAGACTGCGAGAGCACTGTGTTCTCTCTTGATATCCACAAGTCCAATGATGATGATGATGTTGTTTATGTGGCAGTGGGAAATCATGAAGATTCCAATCCAAGCATGGAAGCTCTTTCATGGGCCTTGAACCACGCTGTCACACCCTCTGCCACCGTTGTCTGTCTCCTACACGTTTTCCCGCAAGTCAAGCTCATTCCAAGTCCATTAGGAAAAATTCCAAGGAGTCACGTAAATCTTGAGCATGTTAACATGCACTTGACTCGAGAGAGAGCCAAGAGGAAATTGCTCCTTCAAAAGTTCATTGACCTCTGCGTTCATTCTAAGGTTAAGGTGGAGATGATGCTGATTGAGGGTGACGACGTTGCTAAAGCTATCGTGGACCTTGTTGGAAATCTTAATATAAGAAAACTGGTTATTGGAATTTCCAGGTCTAATTTAAGAAAATGTGAATCTGGAAGGAGAAATTGCATAGCGGCCAAGGTACTAAAATATGCACATGAAAGCTGTGATATAAAAATCATATGTGAAGGAAGAGAAGTGATAGACGAGATGAGTGAGTGCAGTTCACCAGGCTCCACAGCTACTGGGAGTTCAACAGCTTCACAGGAAATAAATGAATTCCGTGGATTTGTCCCACTCAAGCATTTTATGTCCAGTTCGCACTGGTTATTTAGGTTCATCATCTTCAAAGATAAGATGAGTAAATTTGCATAA	966	0.4337	MMGSTRSWEKEQDECMACDTPEESFSCFKSGFMGFKRNQVVDCSLSRRLSSSSSSSSSEIGDSDSEELFEINLKEPLVLDTIREDCESTVFSLDIHKSNDDDDVVYVAVGNHEDSNPSMEALSWALNHAVTPSATVVCLLHVFPQVKLIPSPLGKIPRSHVNLEHVNMHLTRERAKRKLLLQKFIDLCVHSKVKVEMMLIEGDDVAKAIVDLVGNLNIRKLVIGISRSNLRKCESGRRNCIAAKVLKYAHESCDIKIICEGREVIDEMSECSSPGSTATGSSTASQEINEFRGFVPLKHFMSSSHWLFRFIIFKDKMSKFA*	322

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu3g00055	321	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	114	230	-	-
	Lapu3g00055	321	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE	50	286	-	-
	Lapu3g00055	321	Gene3D	HUPs	100	231	IPR014729	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu3g00055	Lapu-Chr3	917789	919295	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu3g00055	102	281	U-box Gene Family	AT2G45910	30.526	7.71e-15	73.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu3g00055	-		-	vun:114175946	401.364