LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu3g00052	ATGTCTACTTCTTTAAAATCCCCAGATGTTTGTATTGTTGGTGTTGCAGGGACGCCAATGGGCGGTTTGCTTGGCATCCTCTCGTGTCTTTCTGCTACTGAGTTAGGCTCAATTGTTATTCAGATGGGAAATCATGAAGATTCCAATCCAAGCATGGAAGCTCTTTCATGGGCCTTGAACCACGCTGTCACACCCTCTGCTACCGTTGTCTGTCTCCTACACGTTTTCCCGCAAGTCAAGCTCATTCCAAGTCCATTAGGAAAAATTCCAAGGAGTCACGTAAATCTTGAGCATGTTAACATGCACTTGACTCGAGAGAGAGCCAAGAGGAAATTGCTCCTTCAAAAGTTCATTGACCTCTGCGTTCATTCTAAGGTTAAGGTGGAGATGATGCTGATTGAGGGTGACGACGTTGCTAAAGCTATCGTGGACCTTGTTGGAAATCTTAATATAAGAAAACTGGTTATCGGAATTTCCAGGTCTAATTTAAGAAAATGTGAATCTGGAAGGAGAAATTGCATAGCGGCCAAGGTACTAAAATATGCACATGAAAGCTGTGATATAAAAATCATATGTGAAGGAAGAGAAGTGATAGACGAGATGAGTGAGTACAGTTCACCAGGCTCCACAGCTACTGGGAGTTCAACAGCTTCACAGGAAATAAACGAATTCCGTGGATTTGTCCCACTCAAGCATTTTATGTCCAGTTCGCTCTGGTTATTTAGATTCATCATCTTCAGAGATAAGATGAGTAAATATATACATAATTCAGAAGCACAGGTTTCGGCGATGATGATTGATTCTAGTGAAATGATGTAA	819	0.4164	MSTSLKSPDVCIVGVAGTPMGGLLGILSCLSATELGSIVIQMGNHEDSNPSMEALSWALNHAVTPSATVVCLLHVFPQVKLIPSPLGKIPRSHVNLEHVNMHLTRERAKRKLLLQKFIDLCVHSKVKVEMMLIEGDDVAKAIVDLVGNLNIRKLVIGISRSNLRKCESGRRNCIAAKVLKYAHESCDIKIICEGREVIDEMSEYSSPGSTATGSSTASQEINEFRGFVPLKHFMSSSLWLFRFIIFRDKMSKYIHNSEAQVSAMMIDSSEMM*	273

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu3g00052	272	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	48	163	-	-
	Lapu3g00052	272	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	29	-	-
	Lapu3g00052	272	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE	48	218	-	-
	Lapu3g00052	272	Gene3D	HUPs	34	165	IPR014729	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu3g00052	Lapu-Chr3	894604	898634	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu3g00052	51	214	U-box Gene Family	AT2G45910	31.034	1.93e-14	71.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu3g00052	-		-	gmx:100799795	291.582