Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00046 ATGTTGTCTGGAAAGCATTCAGTTTTCCTCTTACTCTCCTTCATTCTCTTTTCTGTTTTCCATGCACCTGCTTTTGCAATAAAAAAGTCTTACATAGTCTACATGGGATCGCATGAGTATGGTGAAGGAGCGACAGATGGTGATTTTGATCGAGTTACGCAAGCTCATCATGAGTTCCTTCAATCCTATGTGGGAAGCTTTGAGAAAGCAAAAGATGCAATGATATATTCTTACACAAGGCACATCAATGGCTTTGCTGCCATGCTGGAAGAGGAAGAAGCGGCTGACATTGCAGAACATCCGGAGGTTGTGTCAGTTTTCTTGAACAAAGGAAGAAAACTACACACCACTCATTCATGGGAATTCATGGACATGGAAAGGAATGATGGGGTAGTTCCCTCCGATTCAGTGTTCAGAAAAGCCAGATATGGTGAAGATACTATTATTGCGCATCTTGACACTGGTGTATGGCCGGAATCTCCGAGCTTTAGAGATGAGGGGATGGGACCCATACCATCACGGTGGAAAGGAACTTGTCAACATGATATCACCGGCTTCCGTTGCAACAGGAAGCTTATAGGGGCAAGGTACTTCAACAAAGGTTATCTTGCCTATGTGGGAGGAGAAGCAAAATTTAACAGTACACTGAACACAGCACGAGACTACGAGGGTCATGGATCTCACACACTGTCAACAATAGGAGGAACCTTTGTTCCTGGGGCCAGTGTGTTTGGCTTTGGAAATGGAACTGCCGAAGGTGGCTCTCCTAAAGCCCGGGTTGCTTCTTACAAGGTGTGTTGGCCACCATTTGAAGGCGGTGAGTGCTTTGATGCTGATATCATGGCAGGCTTAGACATGGCCATACATGATGGGGTTGATGTTCTTTCCCTCTCTCTTGGAGGGCTTGCTACGGATTACTTTGAGGATGGTCTAGCAATCGGGGCCTTTCATGCTAACATGAAGGGCATTCCTGTCGTATGTTCTGCTGGAAATTCCGGACCATCACCTGGAACTGTCTCTAATGTTGCACCTTGGATTGTAACAGTTGGTGCAAGCACCTTGGACAGAGAGTTTGACACTGTTGTTCAACTCCACAATGGAAAACGCTTTAAGGGAGCAAGCCTTGCTAAAGCTATGCCGGAAAACAAGCTTTACCCACTAATAAATGCTGCAGATGCAAAATTGGCCAAGGAATCAGTTGAAAACGCTACTCTGTGTCTTCGAGGAACAATTGACCCTGAAAAGGCGAGAGGCAAAATATTGGTTTGCCTTAGAGGTATCAATCCAAGAGTGGAAAAGAGCCTGGTTGCTTTAGAGGCTGGTGCAGCTGGGATGATTCTTTGTAATGACGAGTCTAGTGGCGATGAGCTTATTGCTGATCCTCATCTCCTTCCTGCATCACAAGTTACTTATAAAGATGGTCTTGCCGTCTATGCCTACATGAATTCAACCAATATTCCGCTAGGATATATTGAACCACCCGAGACCAAGTTCCAGACAAAGCCTGCCCCAGTCATGGCAGCTTTCTCCTCAAGAGGGCCCAACACAGTCACGCCAGAGATCCTTAAGCCTGATGTCACCGCTCCTGGTGTGAACATTATTGCTGCCTACTCAGGAGCTATTAGCCCAACCGAATTGAATTTTGATAAGCGCAGGGTTCCTTTTATCACCATGTCTGGGACATCCATGTCTTGTCCTCATGTGGCTGGAGTTGTTGGCCTTCTCAGGACTCTCTATCCTACTTGGAGTCCAGCAGCTATTAAATCTGCAATAATGACAAGTGCTAGGACAAGGGACAACACTGGTAAGCCAATGCTTGATGGGAATAGTGGTGGTGAGGCAACGCCATTTGCCTATGGGTCTGGACACATCAGACCAAATCGTGCCATGGATCCCGGGTTGGTGTATGACTTAACCATCAATGATTACCTAAACTTTCTCTGTGTATCTGGCTATAACCAGACTCAGATAAAGATGTTCTCTGGTGCACATTATCGTTGCCCTGATATAATAGACATCCTGGATTTCAACTACCCTACAATGACAATACCAAAACTTTATGGCTCAGTTAGTTTGACACGAAGGGTGAAAAATGTTGGGTCACCTGGCACTTACACTGCAAGCCTTAGAGTACCAGCAGGTCTTTCCATCTCTGTGGATCCTAAAGTGTTGAAATTTGACAAAATTGGTGAAGAGAAGAGCTATAAGTTGACAGTGGAAGTAACAAGACCGGGTGAGGCTACAGCATTTGGAGGCATAACTTGGTCAGATGGGAAACATCAAGTGAGGAGTCCAATTGTAGTTGGTGGAGTTAGAGGGTAG 2322 0.4565 MLSGKHSVFLLLSFILFSVFHAPAFAIKKSYIVYMGSHEYGEGATDGDFDRVTQAHHEFLQSYVGSFEKAKDAMIYSYTRHINGFAAMLEEEEAADIAEHPEVVSVFLNKGRKLHTTHSWEFMDMERNDGVVPSDSVFRKARYGEDTIIAHLDTGVWPESPSFRDEGMGPIPSRWKGTCQHDITGFRCNRKLIGARYFNKGYLAYVGGEAKFNSTLNTARDYEGHGSHTLSTIGGTFVPGASVFGFGNGTAEGGSPKARVASYKVCWPPFEGGECFDADIMAGLDMAIHDGVDVLSLSLGGLATDYFEDGLAIGAFHANMKGIPVVCSAGNSGPSPGTVSNVAPWIVTVGASTLDREFDTVVQLHNGKRFKGASLAKAMPENKLYPLINAADAKLAKESVENATLCLRGTIDPEKARGKILVCLRGINPRVEKSLVALEAGAAGMILCNDESSGDELIADPHLLPASQVTYKDGLAVYAYMNSTNIPLGYIEPPETKFQTKPAPVMAAFSSRGPNTVTPEILKPDVTAPGVNIIAAYSGAISPTELNFDKRRVPFITMSGTSMSCPHVAGVVGLLRTLYPTWSPAAIKSAIMTSARTRDNTGKPMLDGNSGGEATPFAYGSGHIRPNRAMDPGLVYDLTINDYLNFLCVSGYNQTQIKMFSGAHYRCPDIIDILDFNYPTMTIPKLYGSVSLTRRVKNVGSPGTYTASLRVPAGLSISVDPKVLKFDKIGEEKSYKLTVEVTRPGEATAFGGITWSDGKHQVRSPIVVGGVRG* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00046 773 FunFam subtilisin-like protease SBT1.5 355 498 - -
Lapu3g00046 773 CDD PA_subtilisin_like 361 491 - -
Lapu3g00046 773 SUPERFAMILY Subtilisin-like 114 634 IPR036852 GO:0004252|GO:0006508
Lapu3g00046 773 SUPERFAMILY PA domain 415 485 IPR046450 -
Lapu3g00046 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 560 570 IPR023828 -
Lapu3g00046 773 CDD Peptidases_S8_3 113 595 IPR034197 -
Lapu3g00046 773 FunFam Subtilisin-like protease SBT5.3 19 115 - -
Lapu3g00046 773 Pfam Peptidase inhibitor I9 30 115 IPR010259 -
Lapu3g00046 773 Pfam PA domain 406 476 IPR003137 -
Lapu3g00046 773 Gene3D - 355 499 - -
Lapu3g00046 773 FunFam Subtilisin-like protease SBT1.5 647 770 - -
Lapu3g00046 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 768 IPR045051 -
Lapu3g00046 773 Gene3D Peptidase S8/S53 domain 146 643 IPR036852 GO:0004252|GO:0006508
Lapu3g00046 773 Gene3D - 647 770 - -
Lapu3g00046 773 PRINTS Subtilisin serine protease family (S8) signature 559 575 IPR015500 -
Lapu3g00046 773 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Lapu3g00046 773 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Lapu3g00046 773 ProSiteProfiles Serine proteases, subtilase domain profile. 119 630 - -
Lapu3g00046 773 FunFam Subtilisin-like protease SBT1.5 146 377 - -
Lapu3g00046 773 Pfam Fibronectin type-III domain 675 768 IPR041469 -
Lapu3g00046 773 Pfam Subtilase family 144 608 IPR000209 GO:0006508|GO:0008236
Lapu3g00046 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 115 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00046 Lapu-Chr3 855019 860268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00046 18 768 Subtilisin-like Serine Gene Family AT5G59810 61.640 0.0 961
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00046 - - gmx:100808488 1352.04