Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00040 ATGACGGAGGGTAACGATCAAATATCTCCGGCGGACGGCGGAGACGTGAGCGGCGCCAGCAAAGAGCAGCAGGCGGCGGGAGTGGGGATTCTCCTTCAGATAATGATGTTGGTATTGTCTTTCGTGTTAGGTCACGTCCTTCGTCGCAAGAAGATTTACGTTCTTCCGGAAGCCAGCGCTTCTCTTCTCATTGGCTTGCTCTCTGGCTTCAGTCTCTCGCCTAAACCTTTTTTTTCTAATTTTGGAGCTATTGTAACATTTGCTATATTCGGCACTTTTCTGGCTTCCATTGTGACGGGTGTCTTAGTTTATCTTGGTGGATTGATGTATCTCATGTACAGATTACCTTTTGTTGAGTGTCTAATGTTTGGTGCACTGATATCCGCAACCGATCCTGTTACTGTTTTGTCCATATTTCAGGAGCTTGGTACAGATGTCAATCTATATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCTATTTCTTTATACAGGTCATATCTGGAAATTACTGATCATAAAAAATTTCAATTTAGTCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTTTTCCCGTATTTCTCGTACATGCTTGCTGAAGGTCTTGGGCTGTCTGGTATTGTATCAATATTGTTCACAGGAATGGTCATGAAGCATTACACATTTTCGAATTTGTCACGTAGTTCTCAAAGATTCGTCTCTGCTTTTTTTGAGTTGATATCATCATTAGCTGAGACATTTGTATATTCATTGGAATTGCAAGTGCATTGTTTGATCATTTTGTGCAGGGCAGCCAATGTGTTCTCGTGTGCTTATTTGGTCAACTTGGTTAGGCCTGCCTATCGACAAATTCCACGAAAACACCAGAAAGCGCTTTGGTATAGTGGACTTCGAGGGGCAATGGCTTTTGCCCTTGCTCTGCAATCAATTCATGATCTGCCAGAGGGACATGGACAGACCATCTTAACTGCAACTACTGCAATAGTTGTTTTGACGGTATTACTGATTGGTGGTTCAACAGGCACCATGCTGGAAGCTTTACAAGTTGTAGGTAGTGACAGTCCTATCGAGAGTCCTTTGGCTTCAGTTACCAGAGCGAATTTCGAGGGAAACAATGGTTATCTTTCTCCCGAAGATGAAGAATCATCATCAGGGAACAAAATCAAGATGAAGCTACAAGAATTCCAAAGAAGTGCTGCATCATTTACAGCATTAGATAAAAACTACCTCACCCCATTCTTCACTAGTCAAAATGAAGATGAGGAAGATGAAGAAGATTAA 1290 0.4194 MTEGNDQISPADGGDVSGASKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYVLPEASASLLIGLLSGFSLSPKPFFSNFGAIVTFAIFGTFLASIVTGVLVYLGGLMYLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRSYLEITDHKKFQFSLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGMVMKHYTFSNLSRSSQRFVSAFFELISSLAETFVYSLELQVHCLIILCRAANVFSCAYLVNLVRPAYRQIPRKHQKALWYSGLRGAMAFALALQSIHDLPEGHGQTILTATTAIVVLTVLLIGGSTGTMLEALQVVGSDSPIESPLASVTRANFEGNNGYLSPEDEESSSGNKIKMKLQEFQRSAASFTALDKNYLTPFFTSQNEDEEDEED* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00040 429 Gene3D - 117 168 - -
Lapu3g00040 429 Pfam Sodium/hydrogen exchanger family 184 348 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Lapu3g00040 429 Pfam Sodium/hydrogen exchanger family 40 174 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Lapu3g00040 429 PANTHER SODIUM/HYDROGEN EXCHANGER 179 428 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Lapu3g00040 429 PRINTS Na+/H+ exchanger signature 124 134 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu3g00040 429 PRINTS Na+/H+ exchanger signature 69 83 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu3g00040 429 PRINTS Na+/H+ exchanger signature 84 92 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00040 Lapu-Chr3 787526 796008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00040 52 392 Antiporters AT5G55470 28.193 2.29e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00040 K14724 - gmx:100810105 602.823