LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu3g00037	ATGGCAAGCGCAAGTGTTGCTAATGAAGATAACAAACTCACGCTCTATTCCTACTGGAGAAGTTCTTGTTCCTTCCGAGTCCGAATCGCTCTCAACCTCAAAGGCCTTAAATACGACTACAAGGCCGTCAATCTGTTGAAGGGAGAACAATCCAGCCCCGAGTTTCTCCAGCTCAACCCCGTTGGTTTTGTTCCCGTTCTACTGGATGGCCACACTGTTCTTTACGACTCTCTCGCCATTATTTTGTATTTGGAAGATAAGTATCCTCACAATCCTTTGCTCCCTCATGACATTACTAAGAGGACAGTCAATTTCCAGGCTGCTAGTATTGTTTCCTCAACAATACAACCTCTTCAAAACTTGAGTTTACTGAACTACATCGGGGAGAAAGTTGGCCCTGATGAAAAACTTCCTTGGGCCCAAAGTGCAATTAGAAGAGGCTTTACCGCACTTGAAAAGCTATTGAAAGACCACACAGGAAGATATGCAACCGGGGATGAAGTTTTCTTGGCAGACGTATTTTTAGCACCTCAGTTACATGCAGCATTTAAGAGATTCAACATCCAAATGAACGAATTTCCTGTTCTGTCAAGATTGCATGAGACATATAATGAGATCCCTGCATTCCAGGAGGCTCTACCAGAGAACCAGCCAGATGCAGTACACTAG	669	0.441	MASASVANEDNKLTLYSYWRSSCSFRVRIALNLKGLKYDYKAVNLLKGEQSSPEFLQLNPVGFVPVLLDGHTVLYDSLAIILYLEDKYPHNPLLPHDITKRTVNFQAASIVSSTIQPLQNLSLLNYIGEKVGPDEKLPWAQSAIRRGFTALEKLLKDHTGRYATGDEVFLADVFLAPQLHAAFKRFNIQMNEFPVLSRLHETYNEIPAFQEALPENQPDAVH*	223

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu3g00037	222	CDD	GST_C_Zeta	100	217	IPR034330	-
	Lapu3g00037	222	SFLD	Main (cytGST)	13	202	-	-
	Lapu3g00037	222	SUPERFAMILY	Thioredoxin-like	9	95	IPR036249	-
	Lapu3g00037	222	Gene3D	Glutaredoxin	10	96	-	-
	Lapu3g00037	222	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	97	222	IPR010987	-
	Lapu3g00037	222	NCBIfam	maleylacetoacetate isomerase	14	220	IPR005955	GO:0003824\|GO:0005737\|GO:0009072
	Lapu3g00037	222	PANTHER	MALEYLACETOACETATE ISOMERASE	13	220	-	-
	Lapu3g00037	222	FunFam	Maleylacetoacetate isomerase	96	222	-	-
	Lapu3g00037	222	SFLD	Glutathione Transferase (cytosolic)	13	202	IPR040079	-
	Lapu3g00037	222	Gene3D	-	97	222	-	-
	Lapu3g00037	222	Pfam	Glutathione S-transferase, C-terminal domain	137	211	IPR004046	-
	Lapu3g00037	222	CDD	GST_N_Zeta	13	85	IPR034333	-
	Lapu3g00037	222	SUPERFAMILY	GST C-terminal domain-like	92	220	IPR036282	-
	Lapu3g00037	222	ProSiteProfiles	Soluble glutathione S-transferase N-terminal domain profile.	11	92	IPR004045	-
	Lapu3g00037	222	Pfam	Glutathione S-transferase, N-terminal domain	15	92	IPR004045	-
	Lapu3g00037	222	FunFam	Glutathione S-transferase Z1	11	95	-	-
	Lapu3g00037	222	ProSiteProfiles	Glutaredoxin domain profile.	1	101	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu3g00037	Lapu-Chr3	770982	775424	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu3g00037	12	219	Glutathione S-transferase Gene Family	AT2G02380	62.981	5.88e-97	280

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu3g00037	K01800		-	gmx:547590	397.127