Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00010 ATGGCGCCGCTGATCCTGCATGGTGGTAAAACGAACAAAAATTCCTACAAGACACTCATTGCAGCGGAGTACGCTGGCGTCCCAGTTGAATTTGCTCCAAATTTTGAGATGGGTGTCTCCAATAAATCCCCTCAATTGCTCCAGATGAATCCTATTGGAAAGGTTCCTGTCTTGGAAACACCCGATGGTCCAGTATTTGAGAGCAATTCCATTGCTCGCTATGTTGCTCGGCTGGGGGGTGACAACACTTTGTATGGCTCTTCTTTGTTTGAATATGCCCAGATTGAACAATGGATTGATTTTTCATCACTTGAGATTGATGCTAATATTATTAAGTGGTATGCCCCAAGAGTTGGACGAGGACCATACCTTCCTCCGGCCGAGGAGGCTTCAATTTCTGCACTAAAGAGAGCTTTGGGTGCTTTGAACACTCACCTTGCCTCCAATACTTACCTGGTTGGGCATTCTGTGACCCTGGCTGACATCATATTGACATGCAATTTGTATTTGGGTTTTGCAAACATCCTTGTGAAGAGCTTCACCTCTGAGTTTCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAATCAACCAAACTTCCGAAAGATATTTGGGCAGGTCAAGCAGACTGAGGCTGTTCCACCTGTTCAATCTGCAAAGAAGCCTTCCCAGCCGAAGGAAACTAAGCCCAAGGCCAAAGACGAACCAAAGAAAGAGGCCAAAAGGGAGCCAGAAAAGCCGAAAGAAGAAGTAGAAGAAGAGGCACCTAAGCCCAAACCCAAGAATCCTCTTGATCTTCTCCCTCCAAGTCCAATGATACTGGATGAGTGGAAAAGACTGTATTCGAACACTAAAACAAACTTCAGGGAGGTTGCTATCAAAGGATTTTGGGACATGTATGATGCTGAGGGATACTCTCTCTGGTTTTGTGATTACAAATACAATGATGAGAATACTGTTTCTTTTGTGACATTGAACAAGGTTGGTGGATTTCTTCAGCGGATGGATTTGGCTCGCAAGTATGCATTTGGAAAGATGCTAGTGATTGGATCAAATCCACCGTTTAAGGTGAAGGGGCTGTGGCTTTTCCGTGGGCAAGAAATCCCACAGTTTGTGATGGATGAATGCTATGACATGGAGCTTTACGAGTGGACGAAGGTTGACATAACTGATGAAGCTCAAAAGGAGCGTGTGAATCAGATGATAGAAGATTATGAACCTTTTGAGGGCGAGGCTCTTCTGGATGCCAAGTGCTTTAACCATGACCAACCCGGTGGTGCTGCGCATTCTTTTCATATCAAAGGTTACAACTTTGATTCTGGGCCATCTTTGTTCTCTGGCTTGCAATCAAGGGGTCCTCAGGCTAATCCTCTTGCACAGGTTTTGGATGCCTTGGGCGAGTCTCTTCCATGTGCCACTTACGATTCATGGATGGTTCACATACCTGAAGGTCAATTCTTGTCACGTATTGGCCCTACCGAATTTTTCAAGGACCTTCAACAGTACGCAGGTCCAAATGCTGTACATGAGTGGCGCAAACTTTTAGATGCTGTACTTCCATTATCTACGGCTGCAATGGCTCTTCCCCCTCTATCTATTCGAGGAGACTGGGGTGTGGTTTCCACTGCAGCAGCTAGATATGCTCCCTCTCTCTTAAAATCCTTTCTTCAAATGGGACCTCGGAGTGCTCTTGGGGCCACAAAACTTCTGAGACCTTTCTCCGAAATACTTGATGATTTGGAACTCAAAGACCCTTTCATTCGGAATTGGATTGACCTCCTCTCTTTCTTGCTTGCTGGGGTCAAAGCTAATGCTGTACTTTCAGCAGAGATGGTTTACATGTTTGCAGAATGGTACAAACCAGGATGCTGTCTTGAATACCCCCTTCATGGAAGTGCAGCTATTGTGGATGCTCTTGTGCGAGGACTAGAGAAATTTGGTGGGAGAATTTCTCTCCAAAGTCACGTGGAAAATATTGTTGTTGAAAATGATAGAGCCATTGGAGTCAAGCTGAGGAGTGGTCAATTTCTACGTGCTAAAAAGGCGGTTGTCAGCAATGCATCTATGTGGGACACTTTAAAATTGCTACCTAAAGAAGTTGTTCCAAAGTCTTATTCAGATAGGATTAACACGACTCCTCGATGTGATTCATTCATGCATCTCCATTTAGGATTTGATGCTGAGGGCATACGCAATGATCTGGGGATTCACCATATAGTTGTAAATGACTGGAAAAGAGGAGTTGATGCAGACCAGAATGTTGTGCTGATATCAATACCTAGTGTACTTAGTCCTAATCTGGCTCCGCATGGAAAACACGTGCTACATGCTTATATGCCAGGAACTGAACCATTTGAGTTGTGGGAAGGACTTGATCGTAGGAGTACTAAATACAGAAATCTGAAAGCTGAAAGATCGGAGGTAATGTGGAGAGCTGTGGAGAGAGCTGTGGGGGAAGGTTTCAGCAGGGAGAAATGTGAAGTGAAGTTGGTTGGAAGTCCACTAACACATGAAAGGTTTCTTCGGAGGAACAGAGGAACATACGGGCCAGCAGTACAAGCTGGCACAGATACCTTTCCTGGACATTCAACACCCATCCCACAGCTTTATTGTTGTGGAGACTCCACCTTTCCTGGCATTGGAGTCCCAGCAGTTGCTGCCAGTGGTGCAATTGTAGCTAATTCATTAGTCTCTTTGATAATGGATTCGGCTACTTACGCTCGCATACGAGCTCTGCTGTAG 2742 0.4508 MAPLILHGGKTNKNSYKTLIAAEYAGVPVEFAPNFEMGVSNKSPQLLQMNPIGKVPVLETPDGPVFESNSIARYVARLGGDNTLYGSSLFEYAQIEQWIDFSSLEIDANIIKWYAPRVGRGPYLPPAEEASISALKRALGALNTHLASNTYLVGHSVTLADIILTCNLYLGFANILVKSFTSEFPHVERYFWTLVNQPNFRKIFGQVKQTEAVPPVQSAKKPSQPKETKPKAKDEPKKEAKREPEKPKEEVEEEAPKPKPKNPLDLLPPSPMILDEWKRLYSNTKTNFREVAIKGFWDMYDAEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSNPPFKVKGLWLFRGQEIPQFVMDECYDMELYEWTKVDITDEAQKERVNQMIEDYEPFEGEALLDAKCFNHDQPGGAAHSFHIKGYNFDSGPSLFSGLQSRGPQANPLAQVLDALGESLPCATYDSWMVHIPEGQFLSRIGPTEFFKDLQQYAGPNAVHEWRKLLDAVLPLSTAAMALPPLSIRGDWGVVSTAAARYAPSLLKSFLQMGPRSALGATKLLRPFSEILDDLELKDPFIRNWIDLLSFLLAGVKANAVLSAEMVYMFAEWYKPGCCLEYPLHGSAAIVDALVRGLEKFGGRISLQSHVENIVVENDRAIGVKLRSGQFLRAKKAVVSNASMWDTLKLLPKEVVPKSYSDRINTTPRCDSFMHLHLGFDAEGIRNDLGIHHIVVNDWKRGVDADQNVVLISIPSVLSPNLAPHGKHVLHAYMPGTEPFELWEGLDRRSTKYRNLKAERSEVMWRAVERAVGEGFSREKCEVKLVGSPLTHERFLRRNRGTYGPAVQAGTDTFPGHSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSLIMDSATYARIRALL* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00010 913 Gene3D Glutaredoxin 1 75 - -
Lapu3g00010 913 SUPERFAMILY FAD/NAD(P)-binding domain 421 898 IPR036188 -
Lapu3g00010 913 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 260 419 IPR036433 GO:0003746|GO:0006414
Lapu3g00010 913 SUPERFAMILY eEF1-gamma domain 260 419 IPR036433 GO:0003746|GO:0006414
Lapu3g00010 913 CDD GST_N_EF1Bgamma 6 78 - -
Lapu3g00010 913 FunFam Elongation factor 1-gamma 1 260 420 - -
Lapu3g00010 913 SMART EF1G_2 259 367 IPR001662 GO:0003746|GO:0006414
Lapu3g00010 913 Pfam Flavin containing amine oxidoreductase 422 895 IPR002937 GO:0016491
Lapu3g00010 913 Gene3D - 420 486 IPR036188 -
Lapu3g00010 913 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 260 420 IPR001662 GO:0003746|GO:0006414
Lapu3g00010 913 Pfam Elongation factor 1 gamma, conserved domain 259 367 IPR001662 GO:0003746|GO:0006414
Lapu3g00010 913 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 4 420 IPR044628 GO:0004364
Lapu3g00010 913 SFLD Main (cytGST) 6 191 - -
Lapu3g00010 913 Pfam Glutathione S-transferase, C-terminal domain 133 198 IPR004046 -
Lapu3g00010 913 Gene3D - 607 722 IPR036188 -
Lapu3g00010 913 SUPERFAMILY Thioredoxin-like 1 86 IPR036249 -
Lapu3g00010 913 Gene3D - 81 216 - -
Lapu3g00010 913 SUPERFAMILY GST C-terminal domain-like 74 215 IPR036282 -
Lapu3g00010 913 MobiDBLite consensus disorder prediction 211 268 - -
Lapu3g00010 913 SFLD Glutathione Transferase (cytosolic) 6 191 IPR040079 -
Lapu3g00010 913 CDD GST_C_EF1Bgamma_like 91 211 - -
Lapu3g00010 913 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Lapu3g00010 913 Pfam Glutathione S-transferase, N-terminal domain 3 77 IPR004045 -
Lapu3g00010 913 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Lapu3g00010 913 MobiDBLite consensus disorder prediction 224 260 - -
Lapu3g00010 913 FunFam Elongation factor 1 gamma 81 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00010 Lapu-Chr3 528283 535437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00010 4 419 Eukaryotic Initiation Factors Gene Family AT1G57720 76.202 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00010 - - gmx:100810986 929.858