Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01840 ATGGAGTGCGTCTTGGGTTTTGCATCTTCTGTTTCAAGAGATTTAGTGTGTGGAGCATTAAATCAATTACGTTATCCTTGCTGCTTTAACAATTTCGTCAAAAAGCTTGAGCAAGAAGAGGGCGATTTGATTGTAACGAGAGATAGCGTCCAAAAATTTGTTACACATGCCAAGAGACAAACGAGAAAGACTAGTGAAGTTGTTGACAAGTGGCTGCAAGATGCTATCAGTGACGTAGACAATGTGAATCAGTTGCTGAAAGAGGCAAGAACAAAAAAAATTTGTTGCTTTGGGCACTGTCCAAATTGGATTTGGCGATACCGTGTAGGAAAAAAGTTAGCAAATAAAACTGTGGACCTTGAAAAGTTCATTGAAGAGGGTAGAAAATATGTGCCATTTGACCGCATTGCTACTCTTCCTTCAGGCACCCTTGATATTCTTTCAGAAAAATGCATGAATTTTGAGAGTAGACAATCTGCATATGAGCAACTAGTGGAAGCAGTGAAAAACAATGATGTTGCCATGGTTGGATTGTATGGGATGGGGGGTTGTGGTAAAACCACATTAGCAATGGAAGTTAGGAAGTTAGTAGAAGCGGAGCATCTTTTTGACAAAGTTCTTTTTGTGCCTGTTTCTAGTACAGTGGAAGTTCGAAGGATCCAAGAAAAAATTGCAAGTTCAATGCAGTATACATTTCCTGAAAATGAAGAAATGGAGAGAGCCCAACGATTGTGCTTGAGATTAACCCAAGAAAAAAATATTCTTATGATTCTAGATGATGTGTGGGAGAAACTTGACTTTGGTGGCATTGGGATTCCCTCCTCTGAACACCGTAAAGGCTGCAAAATTCTCATTACCACTAGATCAGAAGAAGTTTGTACTTCAATGGATTGTCAAAGAAAGATTTACCTGCCCATTTTAACGGATGAAGAAGCTTGGACTCTTTTCCAAAATAAAGCACTTATATCTGAAGGCACCCCTGATACCTTAAAGCATCTGGGAAGATTAATTTCCGATGAATGTAAAGGATTGCCTGTTGCCATTGCAGCTGTTGCTAGTAGTTTGAAGGGGAAAGCTGAGACGATATGGAGTGTTGCATTGAATAAATTGAGAAGTTCTAAGCCTATAAATATTGAAAGAGGTTTGACTGATCCCTACAAGTGCTTGCAGTTGAGCTATGATAATTTGGATACTAAAGAAGCTAAATCACTTTTCCTGTTGTGTTCTGTATTCCCTGAAGATTCTGAAATTCCAGTTGAACTTTTAACAAGGTGTGCAATAGGGTTAGGTGTAGCTGGAGAAGCACACTCATACGAGGAGGCAAGGAGTGAAGTGATTGCAGCCAAAATTAAGCTCGTTAGTTCTTGTTTACTGTCGGATGAAGAGGACGAATGTGTCAAAATGCATGACATAGTTCGCGATGTGGCCCACTTGATAGCAAAGAATGAGAATAAGATCATAAAGTGCGAATTGGAAAAAGATGTGACTTTGGAGCAAAATTCAGTAAGATATCTATGGTGTGCGCAATTTCCAACTAATTTGGATTGTTCCAATCTTGAGTTTTTATGCTTACAGGCAAAGAAATTGGAAGAACTGGATGGAATTTTCGAAAGAATGAAAATGCTCAAAGTTTTGATTCTTGTCGGCGAAGAGAAGGGAAAAACACCATTGTCAAAAATGTCTTTCAAAACATTAATAAATCTCCGTTACCTACTCATTTACGGTTGTCAATTGAGTGACTTGTCATTTGTAAGAGATATGAAGAAACTTCAAAGTCTTTCGCTGCATGGCTGTTCATTGCCTTCCTTTGCTGAATTACAAACCGATGTTGCAATTGCACAACTAACAACCTTAAAATTGTTAGAGTTGAATAAATGTGACATTAAAGTGAAGAATTTTGAAGTGATCAAAAGGACCCCACTACTGGAAGAGTTGTACATTGTTGATATTGAAGGAGAATGGGATGCTAACAGTGAAGACAATATTGAATTCTTTAACACGTTTAGTGTCCCCCAAACACTGCAAAGGTATGGAATTGTATTAGGATCCAATAAATTTTATGATTATAATGACGAAGAATTTCGCTCTCATCACAGAACTTTATTACTTAACTATTTTCACATATCAAATGAGGTAATTAAGGGATTGGCGAAAAAAGCAAAGGATCTATTTGTAGCAAATATTCAGGGAGGCGCAAAAAACATCGTCCCTGATATATTTCAGATTGAAGGAGGAGGTTTGAATGAGTTGAATAAGCTTGAGATACGTGATTCTGAAGAGATAGAGTGTTTGATTGACACTAGTAATCATTTGAGTAAGGTGGTAACTCTCCTCTCCAAGTTGCAGACGCTGAGGATCGATAACATGGAAAACCTAAGAGCTTTATGGCATTGTTTTCTACCTGCCAATGGGCCTTTTGAGAACTTAGAGAAGCTGTATTTAAGTGATTGTCCACGGTTGACATCTCTCTTCACGTATGTCGTTGCTCGAAGTTTGGTACAATTGAAAATATTAAAAATATCAAGATGTGATGGACTGAAGCATATATTAGCAGATGATAACAAAACGGAGAAAAGTCAAGAATTCACCACTGGGCATCCTGTAAACATCTTCCAGAATCTTCAGGAAGTAGAGGTAAATAGATGTAGAGAATTAAAACATATATTTTCGGCCAGCATTGTAGGAGGCTTAGCTCAATTGAAAGTGCTCGAGATAGAAAAATGCGACATGCTAGATCAAATAATTGGGGATATTGTTCCATTAGCAGACCAGGATCAAAAAGAAGAACTTCTTGAAATCATTGAGGAAGGTCAGCATCCACATTTGTATAGCACTTCAATTCCATCAACAACAGTTGTGAACCATATCCCAGGAACTATGTCCAGCCTTGCAAGCCTTAGGATAAAATATTGTCCGAAGTTAGGCTCAATTTTTACAGCATCTACAGCTAAGACCTTGACTTCTTTGGAAGAATTGTTCATACAAGATTGCCATAGTTTGAAGCATATAGTAACTCATGAAAGAGTCAACAAAAATCAAAAGGAAAACATTACCGAGGATGACCATGACTTTCAGATTGATATTTCAATCTTCCAAAGTTTGAAAATGCTACATATTAGAGGATGTGACTTATTGCAACGTATATTCCCTGTCTCTTTTGTTGGAGGCATGATGAAATTGAACAATGTAAGAAATAAAGAGGCTGATGACTTGAAAGATCTTTCAAGTCGAAATAATTTCGAAGAGAATTCTTGTCACCAACAACAAAATAATACTCAGATTGAGCTTCCTGCTTTAGAATCACTCAAACTTGATCGTATCCTGGATAGCACCATTCTAGACTGTTATCCTGTAAGATGTCCATCTTTGGAAACACTGTCATTGGGTATTGGGAGATATGTTGGGTTTTTCACTACAAATTGTTCAACAGATGCTTCGAAAGCTAGAAACGGTGATTATATTGCAGTCGAGATATTGAACTTAGACTCTGTTCACCCAGTTGAAAGTGCTCAATATCCTTCAAAACAACCACGAGGTTTGAACTTGCTTATTATGCACAATATTAAAGAGATTGGACTGAAAGGCTTTGATAAGGTAAAGTACCTTTTTAAATTGTCCATTGCTTCATCATTGATGTTGGAAATTTTGAGAATTGAGGAATGTCCGGGACTTGAGCACATTATAGACACTGATGATGAATATGACATAGAGAATTTGAGTGCTATCTTCCCAAACTTAAAAAGGCTCTCAGTGAGTGATTGTGTCCAATTGAAAAATATGCTTGGTCAATATCCCGTAGCCGATCAGGATTATAAGGAGATTCATATTCAGTTCCCAGCATTGGAAATACTCTCTCTTCTTAATCTACCAAATTTTGTTAGCATTTGTGCTACCGACACTCTCACTGTGACGTGGCCATCTTTGAAGGACTTTCAGTGTTACGGATGTTGCTATCCTTTCTATGATTCTGTTAGTTGTTTGACGGTTCCTATGGATTCAAGAGAGCCTATTAGCACAAGTAGGAAGGATCCAAAAGGGGTTCAGAACCATTTCCTCACGTTGCAAACTCTATCCATAAGGAATTCCGATGTAGAAGGTATTTTTTGTCTTAATGGAAGTCGAATTATTGGGCAACAAGTGAGTTTAAGGTTAGAGGATTTGCTGTTGTCAAATCTACCTCAAATGACTTGTATTTGGGTGGCTTCCAAGAACTCAGTTACTCTCCAACATCTTACCTCATTAGAAATAATGGGATGTGCAAAATTGAAAGTAATCTTTCCTCCCTCTGTTTTAAGAAGCTTACCAGAGTTGAAGCGCCTAACCATAGCAGAATGCATGGAATTAAAGCAGATCATGGAAGAAGACGAGGACGATAAAAAATTGTTCAATCTTCTTTCTACACAGCCATGTTTCCCAAAACTAGCAAGGCTGTCCGTTCGGGAATGCCACAAGTTGAAACGTCTGTTCTCGTTCTCTTCATCTAATGATCTTCCTAACCTGATCTTTCTGGCTATAAATGAAGCCCCGGAACTAGAAGAGATTATTGGATGTGAACAAGGAGCTTCAAAGAGTTCTTTTACCTTCCCAAATCTTCAAAAATTAGAAATAGCTGAATGTGCAAGATTGGAAGTAATCTTTCCAAAGTCTGTTTTAAGATGCCTACCAGAGTTGAATTATTTGACGATATGTAAATGCAAAGAATTAAGACAAATCATTGAAGACGATGTGGAGGATAAAAACTTGTCTAATCTTTCTCCTCAACCATGCTTCCCAAAACTAGAAGCATTGCATGTTGAACAATGCCACGAGTTGAAAAGTTTTTTCACTGGATCTGCATTTAATGACCTTTCCAATCTACATCTTTTGATCATAAATGGAGCCTTTAATCTAGAAGAGCTTGTCGCATCTGAACAAGAAAAACCTGTCGAGATGGAAAAGACTAAAGTTGAGCTTCCAAATCTGAAACTTTTAATATTTACGCATTTACCAAACTTTCGCCAAGAGACTGTATCGCTGAATTTAAAGAATTGCATAGTCTGCGAATGTCCAAAACTCTCTTTGACTTCAACAACTACTCTTCGGGAGCTCCGTCAAAATATTCCTTATAAAGATTTTGAAAACACTGTACTTAGAAGGTGGGACTTACAACAGTTGATAGATATATCGGATGAAGATTCCACGATTGATCGTAGCAGTGAGTTTCCTTCATCACAGATTAATGAAAAATCAAAGACTGAATTTATTGGGAAAGATCCTGATTCCGAGGTATTGGGTACTACAACTTCAACGGATTCAGAGCATAACGAAAGGCCATCCCCAAGTCCCTTGGATATTTGTCAACACGAAGCACAATCACAGGAGATTCGGGACGTTGGAAATGAGAGATTTAAAGAGGGGCCTGCAGCAGAGGGAGCTAAGTCAAAATCTTTGTCAACTGGTGTTGAAGACATTAGCATTGCAGGTGGTGTTGCAGCTCACATCGAGTCTGGTGCCAACGACATACTTTCACAAAATTCCAACATTATGAATGAAGGCAAGACAGGAATACAGCGAAGCCAAGAAATCCAAGTACAGAAAGGGTTGAACCTGTTGGATAAACAAGAGGGAATAGATATTGTTTCTCCTAACAACAACATTGACATTTCTCCAGATATCCGTATGAGATTGGGAGCATACAAACATTTTGTTGATCTGGATGATGCACAAATTGCTCTTCTGGTGGAGGCAATAACAAGATATCCTCATCTTTGGAATTCTTGCAAGAAGTACAGTGAGCGCTTTCAAGCTTGGAGATTGAAAATTTTGTCAGATATGTTGGTGTTCCTCCAAAATCAAAGTGTCAATAGTGTCATTCCTCAAAGAGAAAAAGAGTTCCATAAACTATGCGAAGAAGCTGTTGAAATCGGCTTTGAGAGTTCATGGGTAGATGAAATGCGTCAACGTGTTGCGGCGGCGAGGGATCCTAAGCTGGGAGAGGACATTGCACAGAGACAAATTGATGATAATTCGAAGAGGTCTAGTAGTGCGGACATGGTGCCAGATTCCCAGGTTGTTGAACAAGTTGATAGGCCTAATGAAAACTGGAAAGGACCTTCTCCAGGTCTGAAGATCCAGAATGTTAACTGTAGCTTCCAAGAAGATTCTAACTTGATTGATAAAGGAGAAATAGGTGTTGTTTCTAATGACCGCATTATGGCTCAGACAAATGAAGAAGCAGGGAAGGAATTTGTTGCAAAAGTTTCCACTTCAATAGCAACTTCATTAACAAACTCCCAACCAGTTGAAAGGCTAACTCCAAGCTATTTGAATATTCCTCTACCTGAAACACAACCAAATGGGTTGGTGGACAAACAGTGGATAAGTGAACCGTGTCTGATGAACCAACAAAAGCCACTTGGAGAAATTGTAAGTAGCCCCGAAATTACTCAGAGTATTGAGCGAGTTGCTGTAGTGGAAACCGTAGCAAAGAACACCGATATGGCAGCTTCATTAATTCATTCCAAATCCGCTAGCTCACAGTCGAACCAAATAGTTACTTTCCACAGTAAATCACATCCACATAGTGAAATTAGGAGCAGCAAAACAGAGGCACTCATTGCTAAAAAAAATGAAGGCCATCCTGAAATTATTCAAGACTTTGGGGCCAATGATATCATGAGTTTATTTGCACCAGTTGCTGTGGGGAAAGAGGGTGAAGATAACCGAGTTGGAATGACCCTTGTTGAGCTAGAAAAGTGTCTGAAGATGTCTCTGAAGGACTTGGTTAGCTCTGAGACTAACAGCCTTCGCCTTTTGTCTGCTCTTAATTTCCTGTCCAACCTTCCTTTCGAAGATGTAGCTCTATCAGATGGACTCAAAGATATTATAGACACTATGCACCAAGAGTTCCCTAGCATTCTATGTTCCTTTAAGCAAGGCTTTGCTACCACTGACAAGTTGGCAGTACTTGAAGCTCGTCGGAATGAGGTGGCCATCACTATTGTTTCCAAAATTTCCGAGGCAGAGAATTTCTATGATGAAGCTCAACGGAAGGAAGTAGTTTTGAAGGAGCAGATCATTAGGTTGAAGGAAGAAATAAAAGTTTGTGAGGCTGCCTTATTATCTCTCGAGGAGGAAAAAAATAAATGCATTGCGGAAACTATGGGGTACAAAAAGGAGCTTGAAAATGTGAGAAAAGACACTCAAATGGTGGAAGATCAAAGAAAAGTTCGGCAAGAATTGTTTGAGGTGGCTTATAAATGGTCAGTTCTGTGTAGTCAATATGAGCAGAATCGCATGGCTGCTAGAAATCCCTCGTGA 7299 0.3879 MECVLGFASSVSRDLVCGALNQLRYPCCFNNFVKKLEQEEGDLIVTRDSVQKFVTHAKRQTRKTSEVVDKWLQDAISDVDNVNQLLKEARTKKICCFGHCPNWIWRYRVGKKLANKTVDLEKFIEEGRKYVPFDRIATLPSGTLDILSEKCMNFESRQSAYEQLVEAVKNNDVAMVGLYGMGGCGKTTLAMEVRKLVEAEHLFDKVLFVPVSSTVEVRRIQEKIASSMQYTFPENEEMERAQRLCLRLTQEKNILMILDDVWEKLDFGGIGIPSSEHRKGCKILITTRSEEVCTSMDCQRKIYLPILTDEEAWTLFQNKALISEGTPDTLKHLGRLISDECKGLPVAIAAVASSLKGKAETIWSVALNKLRSSKPINIERGLTDPYKCLQLSYDNLDTKEAKSLFLLCSVFPEDSEIPVELLTRCAIGLGVAGEAHSYEEARSEVIAAKIKLVSSCLLSDEEDECVKMHDIVRDVAHLIAKNENKIIKCELEKDVTLEQNSVRYLWCAQFPTNLDCSNLEFLCLQAKKLEELDGIFERMKMLKVLILVGEEKGKTPLSKMSFKTLINLRYLLIYGCQLSDLSFVRDMKKLQSLSLHGCSLPSFAELQTDVAIAQLTTLKLLELNKCDIKVKNFEVIKRTPLLEELYIVDIEGEWDANSEDNIEFFNTFSVPQTLQRYGIVLGSNKFYDYNDEEFRSHHRTLLLNYFHISNEVIKGLAKKAKDLFVANIQGGAKNIVPDIFQIEGGGLNELNKLEIRDSEEIECLIDTSNHLSKVVTLLSKLQTLRIDNMENLRALWHCFLPANGPFENLEKLYLSDCPRLTSLFTYVVARSLVQLKILKISRCDGLKHILADDNKTEKSQEFTTGHPVNIFQNLQEVEVNRCRELKHIFSASIVGGLAQLKVLEIEKCDMLDQIIGDIVPLADQDQKEELLEIIEEGQHPHLYSTSIPSTTVVNHIPGTMSSLASLRIKYCPKLGSIFTASTAKTLTSLEELFIQDCHSLKHIVTHERVNKNQKENITEDDHDFQIDISIFQSLKMLHIRGCDLLQRIFPVSFVGGMMKLNNVRNKEADDLKDLSSRNNFEENSCHQQQNNTQIELPALESLKLDRILDSTILDCYPVRCPSLETLSLGIGRYVGFFTTNCSTDASKARNGDYIAVEILNLDSVHPVESAQYPSKQPRGLNLLIMHNIKEIGLKGFDKVKYLFKLSIASSLMLEILRIEECPGLEHIIDTDDEYDIENLSAIFPNLKRLSVSDCVQLKNMLGQYPVADQDYKEIHIQFPALEILSLLNLPNFVSICATDTLTVTWPSLKDFQCYGCCYPFYDSVSCLTVPMDSREPISTSRKDPKGVQNHFLTLQTLSIRNSDVEGIFCLNGSRIIGQQVSLRLEDLLLSNLPQMTCIWVASKNSVTLQHLTSLEIMGCAKLKVIFPPSVLRSLPELKRLTIAECMELKQIMEEDEDDKKLFNLLSTQPCFPKLARLSVRECHKLKRLFSFSSSNDLPNLIFLAINEAPELEEIIGCEQGASKSSFTFPNLQKLEIAECARLEVIFPKSVLRCLPELNYLTICKCKELRQIIEDDVEDKNLSNLSPQPCFPKLEALHVEQCHELKSFFTGSAFNDLSNLHLLIINGAFNLEELVASEQEKPVEMEKTKVELPNLKLLIFTHLPNFRQETVSLNLKNCIVCECPKLSLTSTTTLRELRQNIPYKDFENTVLRRWDLQQLIDISDEDSTIDRSSEFPSSQINEKSKTEFIGKDPDSEVLGTTTSTDSEHNERPSPSPLDICQHEAQSQEIRDVGNERFKEGPAAEGAKSKSLSTGVEDISIAGGVAAHIESGANDILSQNSNIMNEGKTGIQRSQEIQVQKGLNLLDKQEGIDIVSPNNNIDISPDIRMRLGAYKHFVDLDDAQIALLVEAITRYPHLWNSCKKYSERFQAWRLKILSDMLVFLQNQSVNSVIPQREKEFHKLCEEAVEIGFESSWVDEMRQRVAAARDPKLGEDIAQRQIDDNSKRSSSADMVPDSQVVEQVDRPNENWKGPSPGLKIQNVNCSFQEDSNLIDKGEIGVVSNDRIMAQTNEEAGKEFVAKVSTSIATSLTNSQPVERLTPSYLNIPLPETQPNGLVDKQWISEPCLMNQQKPLGEIVSSPEITQSIERVAVVETVAKNTDMAASLIHSKSASSQSNQIVTFHSKSHPHSEIRSSKTEALIAKKNEGHPEIIQDFGANDIMSLFAPVAVGKEGEDNRVGMTLVELEKCLKMSLKDLVSSETNSLRLLSALNFLSNLPFEDVALSDGLKDIIDTMHQEFPSILCSFKQGFATTDKLAVLEARRNEVAITIVSKISEAENFYDEAQRKEVVLKEQIIRLKEEIKVCEAALLSLEEEKNKCIAETMGYKKELENVRKDTQMVEDQRKVRQELFEVAYKWSVLCSQYEQNRMAARNPS* 2433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01840 2432 Coils Coil 2331 2372 - -
Lapu2g01840 2432 Gene3D Ribonuclease Inhibitor 476 664 IPR032675 -
Lapu2g01840 2432 Gene3D Ribonuclease Inhibitor 1460 1579 IPR032675 -
Lapu2g01840 2432 Gene3D Ribonuclease Inhibitor 1337 1459 IPR032675 -
Lapu2g01840 2432 Gene3D Ribonuclease Inhibitor 696 861 IPR032675 -
Lapu2g01840 2432 MobiDBLite consensus disorder prediction 1726 1777 - -
Lapu2g01840 2432 Gene3D Ribonuclease Inhibitor 1023 1329 IPR032675 -
Lapu2g01840 2432 Coils Coil 72 92 - -
Lapu2g01840 2432 SUPERFAMILY RNI-like 1341 1573 - -
Lapu2g01840 2432 Gene3D - 307 391 IPR042197 -
Lapu2g01840 2432 Pfam NB-ARC domain 163 395 IPR002182 GO:0043531
Lapu2g01840 2432 SUPERFAMILY L domain-like 1031 1317 - -
Lapu2g01840 2432 Gene3D Ribonuclease Inhibitor 862 1021 IPR032675 -
Lapu2g01840 2432 FunFam Probable disease resistance protein At1g61300 150 301 - -
Lapu2g01840 2432 Gene3D - 145 303 IPR027417 -
Lapu2g01840 2432 SUPERFAMILY RNI-like 1527 1687 - -
Lapu2g01840 2432 SUPERFAMILY L domain-like 464 1004 - -
Lapu2g01840 2432 Gene3D - 392 475 IPR036388 -
Lapu2g01840 2432 PRINTS Disease resistance protein signature 248 262 - -
Lapu2g01840 2432 PRINTS Disease resistance protein signature 830 846 - -
Lapu2g01840 2432 PRINTS Disease resistance protein signature 341 355 - -
Lapu2g01840 2432 PRINTS Disease resistance protein signature 175 190 - -
Lapu2g01840 2432 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 862 1136 - -
Lapu2g01840 2432 MobiDBLite consensus disorder prediction 1992 2015 - -
Lapu2g01840 2432 MobiDBLite consensus disorder prediction 1755 1769 - -
Lapu2g01840 2432 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 408 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01840 Lapu-Chr2 31982711 32003898 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01840 172 574 WRKY Transcription Factor Family AT5G45050 24.700 8.80e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01840 - - vra:106753628 3010.32