Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01834 ATGATGTCGTCCAAGTTCCATCAAGCGTGGAAGCCCGTTTTGGTGATGATTGTTGTTAACCTAGCTTTGGCTTTTGTGAATATATTTCTTAAGAAAGTTCTTAATGAAGGAGTGGACTACTTAACCATCTTAACCTATCGCCAAGCTATTTCAGCCATTTTCTTGGCACCTATTGCCTTCTTCTATGAGAGGGAAAGGAAGGTGGAGGGTCATATAATTTGTCTGCTTTTCCTAAGTGCTCTTGTGGGGGTTACATTCACTCAATACCTCTTTCTTATTGGACTAGAATATACATCTGCAACCTTCTCATGTGCATTCCTAAATATGGTGCCTGTATTTACCTTTATTATGGCACTGCCACTGGGGTTAGAGAAGGTAAACATGAAAAAACTGAGTGCTAAGGCCAAGGTGTTGGGAACTTTTGTGTGTATTGGTGGAGCTTTGATGTTGATCCTTTATAAGGGAATGCCCTTAATCAACCAAGAAGCAGAGCACACAGCAGACAAAGGCACAGCAACACCATCAGCTTCCAAGTTAAAGAAATGGATAATAGGTTCACTGCTTCTGACTGCAGGATGTGTCTTGTGGTCTTCATGGTTTCTCATGCAAGCAAGGATTAGCAAAAAGTATCCCTGTCAATACTCTAGCACAGCCATTTTGTCCTTTTTTGCTGCCATTCAATCAGCAATATTAACTTTGGTCATTGATAGAAATAAGACCAAATGGATTCTCAAAGGAAAGTTAGAGATTCTTACTGTTGTATATTCTGGGCTGGTGGGATCAGGATTGTGCTATGTGGCAATGTCATGGTGCGTGAAACAAAGGGGTCCAGTTTTCACTTCAGCATTTACCCCTCTTCTACAGATGTTTGTGGCAGTGCTTGATTTCTCTATATTACAAGAGGAAATTTATCTGGGAAGTGTTGCAGGATCAATCTTGGTTATTTCTGGCGCTTATATTCTACTTTGGGGTAAAAGTAAAGAGGAAGAACAACAAGAGGCCGTGAAGGATTCTGAAGAAGGTGAAGAATGTATGAATAATTTTGAGGCCAATTCAAATGCAGCCTCTAAGCTAAGGCCTAATGGAGAACAGGGATTATCTGAATTACAAGTGAAGCAGTTGGCCATTACAGTAACTAGAAGTTGA 1146 0.4049 MMSSKFHQAWKPVLVMIVVNLALAFVNIFLKKVLNEGVDYLTILTYRQAISAIFLAPIAFFYERERKVEGHIICLLFLSALVGVTFTQYLFLIGLEYTSATFSCAFLNMVPVFTFIMALPLGLEKVNMKKLSAKAKVLGTFVCIGGALMLILYKGMPLINQEAEHTADKGTATPSASKLKKWIIGSLLLTAGCVLWSSWFLMQARISKKYPCQYSSTAILSFFAAIQSAILTLVIDRNKTKWILKGKLEILTVVYSGLVGSGLCYVAMSWCVKQRGPVFTSAFTPLLQMFVAVLDFSILQEEIYLGSVAGSILVISGAYILLWGKSKEEEQQEAVKDSEEGEECMNNFEANSNAASKLRPNGEQGLSELQVKQLAITVTRS* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01834 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Lapu2g01834 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 327 - -
Lapu2g01834 381 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020
Lapu2g01834 381 Pfam EamA-like transporter family 11 151 IPR000620 GO:0016020
Lapu2g01834 381 PANTHER WAT1-RELATED PROTEIN 11 333 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01834 Lapu-Chr2 31948382 31951210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01834 5 330 Nodulin-like Gene Family AT1G11460 40.426 7.08e-84 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01834 - - gmx:100794199 655.21