Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01818 ATGGAGGCAATTCGGATAAATTGTGCTGGATATCCCACTAGAACGAAATTTGATGAATTTGTTCAGCGGTTTAAGATACTAGAACCTAAGATGAATCTGACGAATAACAATAACCATTCATTCTCCAGCCCTGATGGGATGACTGCTTGCAAGAGGCTTCTTGATAGAGTGGGCCTTAAAGATTATCAGATTGGAAAGACAAAGGTGTTTCTGAGAGCAGGTCAAATGGCAGAACTAGACGCATGTCGTGCAAAGATCCTGGGAAGATCAGCAAGTGTCATTCAGAGAAAAGTCCGCACGTTTCTCTGTCAGAAACAATACATCTTATTGCAGCTGTCTGCCATAGAACTTCAAAGGGTTGCCAAAGGACAACTTGCACGACATCAGTATGAATGCATGAGGAAGGAAGCAGCTTCTTTGAAAATTCAGAAAGATTTCCTGATGTATATTTCCAGAAATGCTTACAAAACTATTTATGCCTCAGCTATTTATATTCAAATTGGCATGAGAGGGATGGCTGCTAGACATGACCTTAGATTCAGAAAACGATCACAAGCTGCAATTGTTATTCAGGGTCTATATAGAAGTTATACAGCTCGTACATATTTTCAGAGGCTAAAGAAAGCAACAATTTTTGCAGTGTGTTCCTGGAGGAGAACATTGGCTCGGAGAGAACTTCGAAGGCTTAAAATGGCTGCCAAGGCACTTGAAGCTGCAAAAAATAATTTGCAAAAGCAAGTCAAAGAATTAACTTCGTGTCTAGAAGAAGAGAAGACAATGAGGGAAGCCAAGACACAAGAAATTGAAAAACTACAACAAGCTTTGCAAGAGAAGGAGCTTCAGTTACAAGAAATTAAGGAAGCCAAGACACAAGAAATTGAAAAACTAAAACATGCTTTGCAAGAGATGCAGCATCAGTTCCAAGAAATTAAGGAAGCCAAGACACAGGAAACTGAAAAACTACACCAGGATTTGCAACAGTTCCAAGAAACTAAGACAGTGATCATTCAGGAACAAGAGGCTGCCAAGAAAGTAGTTGAACAACCTCCAATTATGCAGGAACTGATGAATTCATTGGAAAAGAAAATTGTGCAGGAGTTACCTACTAATGTTACTAACTCTGATAACTCTGAGTTGATCAATAAGCTTACTTTAGAAAATGAACTCATTAAGGAACGGATTAAATCATTGGAAAAGAAAACTACTTCACAAGAGTTTCCGGTTAATGTTACTAACAATGAGTTTATCTATAAGCTTGCTTCAGAAAATGAACATCTTAAGGTATAA 1287 0.3831 MEAIRINCAGYPTRTKFDEFVQRFKILEPKMNLTNNNNHSFSSPDGMTACKRLLDRVGLKDYQIGKTKVFLRAGQMAELDACRAKILGRSASVIQRKVRTFLCQKQYILLQLSAIELQRVAKGQLARHQYECMRKEAASLKIQKDFLMYISRNAYKTIYASAIYIQIGMRGMAARHDLRFRKRSQAAIVIQGLYRSYTARTYFQRLKKATIFAVCSWRRTLARRELRRLKMAAKALEAAKNNLQKQVKELTSCLEEEKTMREAKTQEIEKLQQALQEKELQLQEIKEAKTQEIEKLKHALQEMQHQFQEIKEAKTQETEKLHQDLQQFQETKTVIIQEQEAAKKVVEQPPIMQELMNSLEKKIVQELPTNVTNSDNSELINKLTLENELIKERIKSLEKKTTSQEFPVNVTNNEFIYKLASENEHLKV* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01818 428 Gene3D - 11 82 - -
Lapu2g01818 428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 140 IPR027417 -
Lapu2g01818 428 Coils Coil 219 331 - -
Lapu2g01818 428 ProSiteProfiles Myosin motor domain profile. 1 84 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu2g01818 428 PANTHER MYOSIN 1 186 - -
Lapu2g01818 428 FunFam unconventional myosin-Va 137 184 - -
Lapu2g01818 428 ProSiteProfiles IQ motif profile. 183 210 IPR000048 GO:0005515
Lapu2g01818 428 Pfam Myosin head (motor domain) 1 72 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu2g01818 428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 235 IPR027417 -
Lapu2g01818 428 Gene3D - 185 235 - -
Lapu2g01818 428 Gene3D - 87 136 - -
Lapu2g01818 428 Gene3D - 137 184 - -
Lapu2g01818 428 SMART iq_5 182 204 IPR000048 GO:0005515
Lapu2g01818 428 SMART iq_5 134 156 IPR000048 GO:0005515
Lapu2g01818 428 SMART iq_5 205 227 IPR000048 GO:0005515
Lapu2g01818 428 SMART iq_5 109 131 IPR000048 GO:0005515
Lapu2g01818 428 SMART iq_5 157 179 IPR000048 GO:0005515
Lapu2g01818 428 SMART iq_5 86 108 IPR000048 GO:0005515
Lapu2g01818 428 ProSiteProfiles IQ motif profile. 160 187 IPR000048 GO:0005515
Lapu2g01818 428 ProSiteProfiles IQ motif profile. 135 161 IPR000048 GO:0005515
Lapu2g01818 428 Pfam IQ calmodulin-binding motif 89 107 IPR000048 GO:0005515
Lapu2g01818 428 Pfam IQ calmodulin-binding motif 185 204 IPR000048 GO:0005515
Lapu2g01818 428 Pfam IQ calmodulin-binding motif 113 130 IPR000048 GO:0005515
Lapu2g01818 428 Coils Coil 380 400 - -
Lapu2g01818 428 ProSiteProfiles IQ motif profile. 110 139 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01818 Lapu-Chr2 31853332 31856792 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01818 1 405 Myosins gene family AT5G43900 45.833 1.09e-99 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01818 K10357 - gmx:100788123 509.605