Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01817 ATGTTTCCAAGATCAACGCATGAAACATTTGCTGAAAAGCTGTATCAAACCTTTAAAGGCAACAAACGCTTCAACAAGCCAAAGTTGTCTCGCACAGACTTCACCATTAACCACTATGCCGGTGATGTAAGTGAAGTCACTTATAAAACTGATCTTTTCCTTGATAAAAATAAAGACTACGTTATTCCGGAGCATGCTGCTCTACTCAGTGCCTCCAAGTGCTCATTTGTTTCAGGGTTGTTCCCACCTTTACCTGAGGATGCTATAAAATCGAAAAAGTTTTCTTCTATAGCCACTCAGTTTAAGCTACAACTGCAATCTTTGCTTGAAACACTAAATGCTACTGAGCCACACTACATTCGTTGTGTAAAGCCAAATAATCTTCTGAAACCAGGGGTATTCGAGAACAATAATGTGTTGCAGCAGCTTCGATGTGGAGTAAGTTCAATGCCATTTTGGCTGAGTTCTCTCTTTTATGACATGAGTATTCTGGCCAAGTGA 501 0.3992 MFPRSTHETFAEKLYQTFKGNKRFNKPKLSRTDFTINHYAGDVSEVTYKTDLFLDKNKDYVIPEHAALLSASKCSFVSGLFPPLPEDAIKSKKFSSIATQFKLQLQSLLETLNATEPHYIRCVKPNNLLKPGVFENNNVLQQLRCGVSSMPFWLSSLFYDMSILAK* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01817 166 Pfam Myosin head (motor domain) 1 145 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu2g01817 166 Gene3D - 1 115 - -
Lapu2g01817 166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 145 IPR027417 -
Lapu2g01817 166 Gene3D Myosin VI head, motor domain, U50 subdomain 60 93 - -
Lapu2g01817 166 Gene3D Kinesin motor domain 116 145 IPR036961 -
Lapu2g01817 166 ProSiteProfiles Myosin motor domain profile. 1 166 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu2g01817 166 SMART MYSc_2a 1 166 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu2g01817 166 PANTHER MYOSIN 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01817 Lapu-Chr2 31852513 31853298 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01817 1 146 Myosins gene family AT1G54560 77.397 3.07e-75 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01817 K10357 - gmx:100791031 271.552