Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01815 ATGATGATAAGGGCACTGATTATTGTCTTGAATGCACAGGCTGGTCAGCTCAATTATGTAGTGGGGTCCCATGTTTGGGTAGAGGACCCTGAGTTAGCTTGGATAGATGGAGAAATCCAGGAATCTAAAAAAGATGAGCTCACGATTATCTTTGAATCCGGCACGAGGGTTGTGAGCAAATCGGCTAACATGTATCCCAAAGATCCAGAATTCCCACCTAATGGTGTGGAAGATATGACAAGACTGGCATATCTACATGAACCAGGAGTTCTTCAGAATTTGCAGATTCGGTATTCCGGAAATGAAATTTATACATACACTGGAAATATATTGATAGCTGTGAACCCTTTTCAAAGGTTACCTCATTTGAGTGAAACTAGCACCATGGCAAAGTATAAAGGTGCGGCTTTTGGTGAGCAGAGCCCACATCCTTTTGCAATTGCAAGTTCTGCATATAGCAAGATGATAAACGAAGAAAGAAGCCAATCTATTCTGGTTAGTGGAGAAAGTGGAGCTGGCAAAACTGAAAGTACAAAGATGCTTATGCATTATCTTGCTTTTTTGGGAGGGAGAGCAGCAACTGAAGGACGGTCTGTGGAGCAACAAGTTCTCGAGTCCAATCCAGTTTTGGAAGCATTTGGCAATGCAAAGACAGTTAGGAATAATAATTCTAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATCAAAAGGGGAGAATTTCAGGAGCTGCTATCAGAACATATTTGCTGGAACGATCCCGTGTCTGTCAAGTTTCTGATCCTGAGAGAAATTATCATTGCTTTTATATGCTTTGTGCTGCACCTAAAGAGGATGTTGGTAAGTACAAACTGGGAGATCCAAGAAAATTCCATTACCTTAATCAATCAAATTGCATTGAGCTGGATGGGTTGGATGATTCTAAGGAGTACCATGCAACTAAGAGAGCTATGGAGGTTGTTGGGATCAGCTCAGAGGAACAGGATGCTATATTTCGAATAGTAGCCGCAGTACTTCATTTAGGAAACATTGAGTTTGTTAAGGGAGCGGAAGAGGAGTTGGATTCCTCTCAGCCCAAGGATGAAAAATCGTTTTACCACCTAAAAACCGCAGCAGAGCTTTTGATGTGTGATGAGAAGTCCCTTGAAGACTCTTTCTGCAAACGTGTTATGGTGACCCGTGGCGACACCATAACAAAATCACTTGATCCAAATGCTGCAGTTCTCAGCAGAGATGCACTAGCTAAAATAGTTTATTCAAGGCTTTTTGACTGGATTGTCTGCAAGATAAACAACACTATCGGGCAAGATCCAGATTCAAATCACTTGATTGGAGTTCTTGATATATACGGGTTTGAGAGTTTCAAAACCAACAGCTTTGAGCAATTTTGTATCAATTTGACAAATGAGAAATTACAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAGATTGATTGGAGTTATATTGAATTCGTTGATAATCAAGATGTTCTTGATCTCATCGAGAAGAAACCTGGTGGTGTTATTGCTCTCCTGGATGAGGCCTGTATGTTTCCAAGATCAACGCATGAAACATTTGCTGAAAAGCTATATCAAACCTTTAGAGACAACAAACGCTTCAGCAAGCCAAAGTTGTCTCGCACAGACTTCACAATTAACCACTACGCTGGCGAGGTCACTTATCAAACTGATTTTTTCCTTGATAAAAATAAAGACTACGTTGTTCCGGAGCATGCTGCTCTACTCAGTGCTTCGAAGTGCTCCTTTGTTTCAGGGTTGTTCCCACCTTTACCCGAGGAAACTACAAAATCAACAAAGTTCTCTTCTATAGCCACTCAGTTTAAGCTGCAACTGCAATCTTTGCTTGAAACACTAAACGCTACCGAGCCACACTATATTCGTTGTGTAAAGCCAAATAATCTTCTGAAGCCAGGGATATTCGAGAACAATAATGTGTTGCAGCAGCTTCGATGTGGAGGAGTAATGGAGGCAATTCGGATAAGTTGTGCTGGATATCCCACTAGAAAGAACTTTGATGAATTTGTTCAGCGGTTTACCATCCTGGAACCTAAGGTTCTGAAAGCATGCCCTGATGAGATGACTGCTTGCAAGAGGCTTCTAGATAGAGCGAACCTTAAAGACTATCAGATTGGAAAGACAAAAGTGTTTCTGAGAGCAGGTCAAATGGCAGAACTAGATGCATGTCGTGCTGAGGTCCTGGGAAGGTCTGCAAGTGTTATTCAGAGAAGAGTTCGCTCGTTTCTCTGTCGGAAACAATACATCTTATTGCAGTTGTCTGCCATAGAAGTTCAAAGGGTTGCGCAAGGACAACTTGCACGACATCGGTATGAATGCTTGAGGAGGGAAGCAGCTTCTTTGAAAATTCAGAAAGAATTCCGCATGCATATTTCCAGAAATGCTTACAAAGCTAAATATGCCTCAGCGATTTATATTCAAACTGGTATGCGAGGGATGGCTGCGAGAAATGACCTCAGATTTAGGAAACAGACACAAGCTGCAATTGTTATTCAGGGTCGATACAGAGGTCATTCGGCTCGTTGTTATTTCCTGAGGCTAAAGAAAGCAGCAATTTTTGCACAGTGTTCCTGGAGGAGAACAATGGCACGGAGGGAACTTCGAAAGCTTAAAATGGCTGCCAAGGAAGCTAAGGTACTAGAAGAGGCAAAAAATAATCTGGAAAAGCAAGTCAAAGAATTAACTTCATGTCTGGAAGAAGAAAAAACAATGAGGGAAGCCAAGACACGGGAAAATGAAAAACTACAGCATGCTTTGAAAGAGAAGGAGCTTCAATTCCAAGAAATTAAGGAAGCCAAGACACAGGAAACTGAAAAACTACAGCATGCTTTGAAAGAGAAGGAGCTTCAATTCCAAGAAATTAAGGAAGCCAAGACACAGGAAACTGAAAAACTACAACATGCTTTGCAAGAGATGGAGATACAGTTCCAAGAAACTAAGGCAGCGCTCATTCAGGAACAAGAGGCTGAACAGGTTAATTCATTGGAAAAGAAAACGGAACTGATTAATTCATTGGAAAAGAAAACTGTACAGGAGTCTTCTGTTGATGCTACCGACAATGAATTTGTTAGTAAACTTAAGACAGAAAATGAACAACTTAAGGGTCAGGTTAATTCATTGGAAAGAAAAATTGATGAAGCGGAGAGGAAATATGAAGAAAGTAGCAGGATTAGTGAGGAGCGCATGAGCCAAATTATTGAGACAGAATCAAAGATGATTGAGATAAAGACAAATATGCAGAGGCTTGAAGAAAAAGTATCCGATATGGAAACTGAGAATCAAGTTTTGCGGCAGCAAACCTTGTTGAGTTCATCATCAAGAAGAATGTCAGGAAAGTTTTCACCTGCTACAGCTCCGGAGAGTGTAGATATTCTTTTCAAATGTGTGACAAAAGATCTTGGGTTCTCTGAAGGAAAACCTGTTGCAGCATTTACCCTTTACAATTGTCTGCTACATTGGAAATCTTTTGAAGCAGAAAAAACAAGCATATTTGATCGTCTTATTCAGATTATTGGTTCTGAAATAGAGGATCCAGACAAAAATGATTGTATGGCTTATTGGCTATCCAACACATCTTCCTTGTTTTTCCATCTTCATCGATGTCTAAGAGTACCTACAGCACGGAAACCTCCCACTCCGACATCATTTTTTGGGAGGATGACCCAGGGTTTCCGCTCATCTAATAGTCTTTCCAGCAGTGCTTTTGATGTAGTGCATCAGGTTGATGCCAAGTATCCAGCTTTGCTTTTCAAGCAACAGCTTGCAGCTTATGTGGAAAAGATATATGGAATCGTTCGAGAAAATTTTAGAACAGACTTGGCACCTCTGCTTTCTTCTTGCATTAAGGCAGATAGAGCATCAGATGACAACAGCGAACAAGCTGGTTCTTGGCACAGCATTATGGAATGCCTTAATAAATATCTCAAGATTATGAAAGAAAACTATGTGCCTACTGTTCTAGTTCAGAAGCTATTTAATCAAATCTTTCAATACATCAATGTGGAAATCTTCAATAGCCTTCTTTTGCATGGTGAATGCTGCACATTCAAACATGGAGGATATATAAAAACAGGGTTGGCTGAACTAGAAGTTTGGTGTACTGAAGCAACGGAAGAGTACATTGGCTCATCTTTGGATGAACTCAAACATGCAACACAAGCAGTTAGATTCTTGGTTGCAGAACAGAAGGATGAGCTATCTTATGATGATCTTACAAATGACCTATGCCCTGTCCTGAGTGCTCAACAGCTTTATAGAATATGTACACTTTACTCTGATGATGATGACAAAAAACAAAGTGTATCAACAGATGTCACTACTAGATTGAAGCTTCTAATGACAGATGATGAAGATGAAGATAGCAAAACCTACTTGTTGGAGGACAACACAAGTCATCCTATTATAGTTGAAGAGATCCCTGCTTCTGCTCAAGATAAGACCACTCCAAAAGTAGCACCTCCTGCAGAACTTCTTGAGAATGCAAACTTCCAATTTCTACATGACTATTGTTAG 4575 0.4039 MMIRALIIVLNAQAGQLNYVVGSHVWVEDPELAWIDGEIQESKKDELTIIFESGTRVVSKSANMYPKDPEFPPNGVEDMTRLAYLHEPGVLQNLQIRYSGNEIYTYTGNILIAVNPFQRLPHLSETSTMAKYKGAAFGEQSPHPFAIASSAYSKMINEERSQSILVSGESGAGKTESTKMLMHYLAFLGGRAATEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPKEDVGKYKLGDPRKFHYLNQSNCIELDGLDDSKEYHATKRAMEVVGISSEEQDAIFRIVAAVLHLGNIEFVKGAEEELDSSQPKDEKSFYHLKTAAELLMCDEKSLEDSFCKRVMVTRGDTITKSLDPNAAVLSRDALAKIVYSRLFDWIVCKINNTIGQDPDSNHLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGVIALLDEACMFPRSTHETFAEKLYQTFRDNKRFSKPKLSRTDFTINHYAGEVTYQTDFFLDKNKDYVVPEHAALLSASKCSFVSGLFPPLPEETTKSTKFSSIATQFKLQLQSLLETLNATEPHYIRCVKPNNLLKPGIFENNNVLQQLRCGGVMEAIRISCAGYPTRKNFDEFVQRFTILEPKVLKACPDEMTACKRLLDRANLKDYQIGKTKVFLRAGQMAELDACRAEVLGRSASVIQRRVRSFLCRKQYILLQLSAIEVQRVAQGQLARHRYECLRREAASLKIQKEFRMHISRNAYKAKYASAIYIQTGMRGMAARNDLRFRKQTQAAIVIQGRYRGHSARCYFLRLKKAAIFAQCSWRRTMARRELRKLKMAAKEAKVLEEAKNNLEKQVKELTSCLEEEKTMREAKTRENEKLQHALKEKELQFQEIKEAKTQETEKLQHALKEKELQFQEIKEAKTQETEKLQHALQEMEIQFQETKAALIQEQEAEQVNSLEKKTELINSLEKKTVQESSVDATDNEFVSKLKTENEQLKGQVNSLERKIDEAERKYEESSRISEERMSQIIETESKMIEIKTNMQRLEEKVSDMETENQVLRQQTLLSSSSRRMSGKFSPATAPESVDILFKCVTKDLGFSEGKPVAAFTLYNCLLHWKSFEAEKTSIFDRLIQIIGSEIEDPDKNDCMAYWLSNTSSLFFHLHRCLRVPTARKPPTPTSFFGRMTQGFRSSNSLSSSAFDVVHQVDAKYPALLFKQQLAAYVEKIYGIVRENFRTDLAPLLSSCIKADRASDDNSEQAGSWHSIMECLNKYLKIMKENYVPTVLVQKLFNQIFQYINVEIFNSLLLHGECCTFKHGGYIKTGLAELEVWCTEATEEYIGSSLDELKHATQAVRFLVAEQKDELSYDDLTNDLCPVLSAQQLYRICTLYSDDDDKKQSVSTDVTTRLKLLMTDDEDEDSKTYLLEDNTSHPIIVEEIPASAQDKTTPKVAPPAELLENANFQFLHDYC* 1525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01815 1524 Coils Coil 1086 1120 - -
Lapu2g01815 1524 Gene3D Kinesin motor domain 77 676 IPR036961 -
Lapu2g01815 1524 CDD MyosinXI_CBD 1141 1491 IPR037975 GO:0007015
Lapu2g01815 1524 FunFam Myosin 2 324 443 - -
Lapu2g01815 1524 ProSiteProfiles IQ motif profile. 772 801 IPR000048 GO:0005515
Lapu2g01815 1524 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 20 69 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lapu2g01815 1524 PANTHER MYOSIN 66 849 - -
Lapu2g01815 1524 Gene3D Myosin VI head, motor domain, U50 subdomain 324 615 - -
Lapu2g01815 1524 Gene3D - 681 744 - -
Lapu2g01815 1524 Pfam IQ calmodulin-binding motif 751 769 IPR000048 GO:0005515
Lapu2g01815 1524 Pfam IQ calmodulin-binding motif 846 865 IPR000048 GO:0005515
Lapu2g01815 1524 Pfam IQ calmodulin-binding motif 799 818 IPR000048 GO:0005515
Lapu2g01815 1524 Coils Coil 1044 1078 - -
Lapu2g01815 1524 Gene3D - 800 846 - -
Lapu2g01815 1524 Gene3D - 749 799 - -
Lapu2g01815 1524 Gene3D - 847 896 - -
Lapu2g01815 1524 FunFam unconventional myosin-Va 799 847 - -
Lapu2g01815 1524 Pfam DIL domain 1345 1448 IPR002710 -
Lapu2g01815 1524 Gene3D - 453 637 - -
Lapu2g01815 1524 SMART DIL_2 1344 1451 IPR002710 -
Lapu2g01815 1524 ProSiteProfiles Dilute domain profile. 1186 1469 IPR002710 -
Lapu2g01815 1524 ProSiteProfiles IQ motif profile. 797 823 IPR000048 GO:0005515
Lapu2g01815 1524 Gene3D - 264 322 - -
Lapu2g01815 1524 Pfam Myosin head (motor domain) 76 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu2g01815 1524 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 799 IPR027417 -
Lapu2g01815 1524 FunFam Class V myosin 453 594 - -
Lapu2g01815 1524 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 800 896 IPR027417 -
Lapu2g01815 1524 ProSiteProfiles IQ motif profile. 845 871 IPR000048 GO:0005515
Lapu2g01815 1524 SMART iq_5 796 818 IPR000048 GO:0005515
Lapu2g01815 1524 SMART iq_5 819 841 IPR000048 GO:0005515
Lapu2g01815 1524 SMART iq_5 867 889 IPR000048 GO:0005515
Lapu2g01815 1524 SMART iq_5 844 866 IPR000048 GO:0005515
Lapu2g01815 1524 SMART iq_5 771 793 IPR000048 GO:0005515
Lapu2g01815 1524 SMART iq_5 748 770 IPR000048 GO:0005515
Lapu2g01815 1524 SMART MYSc_2a 68 747 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu2g01815 1524 Coils Coil 884 1010 - -
Lapu2g01815 1524 PRINTS Myosin heavy chain signature 208 235 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu2g01815 1524 PRINTS Myosin heavy chain signature 104 123 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu2g01815 1524 PRINTS Myosin heavy chain signature 496 524 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu2g01815 1524 PRINTS Myosin heavy chain signature 161 186 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu2g01815 1524 PRINTS Myosin heavy chain signature 443 471 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu2g01815 1524 FunFam unconventional myosin-Va 848 895 - -
Lapu2g01815 1524 Pfam Myosin N-terminal SH3-like domain 22 60 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lapu2g01815 1524 FunFam Myosin heavy chain 264 319 - -
Lapu2g01815 1524 ProSiteProfiles Myosin motor domain profile. 74 746 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu2g01815 1524 ProSiteProfiles IQ motif profile. 868 897 IPR000048 GO:0005515
Lapu2g01815 1524 ProSiteProfiles IQ motif profile. 820 849 IPR000048 GO:0005515
Lapu2g01815 1524 CDD MYSc_Myo11 88 734 IPR036018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01815 Lapu-Chr2 31826580 31844425 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01815 14 1522 Myosins gene family AT1G04600 57.522 0.0 1909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01815 K10357 - gmx:100788123 2465.65