Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01808 ATGAGTTCTAACTCTAAAGAGAATGAAGTTCCTTTGGAACAAGAAAAGGTGGATGATGCATACCTCTCTGCTGTGTTGCTTTGTTTTAGCAGGGTCCTCCCTGCAGTTCTAAATGCTGCTATTGACATCAATTTGTTTGATGTCATAGCAAAGGCAAAGAGTTCTTGTGATGACTCAAGTTTTTCTGCCTCTGAAATTGCTTCTTTGCTTCCAAATCAGCATCCACAATTGGCTAATAGGCTTGAAAGAATGTTGCCATTGTTGACTAGTTACTCTCTTTTGCATTGCTCCATTCGCACCAATGAAGATGGTAAGATAGAAAGGGTTTATGCTCTCTCACCTGTTGGAAAATACTTTGCTTATGATGATGAAGGAATCTCTGTGGCTCCACTCTCAACCTTACTTCATCGCGGATTTCATGACCTTTGGAAGGATGCGAAAGGTGCATATCTAGACCCTGATTGCAATAACCATTTCGAAAATGTCTATGGAATGCTGTCATATCAGTATATGGAAAAAAATGCAGAGTTGAATGAAATGTTTTACAAAGCAATGGCTCATGCTGGTCCAATAGAAGTGAAAAGGGTACTCAAAGTATATAAAGGATTTGAGGGGTTGTCAACACTGGTTGATGTAGGAGGTGGAGTAGGAGAGACCCTGAAACTGATTGTGTCTGCATACCCTTCAATTAAAGGAGTTAATTTTGATTTGCCTCAGATGATTGAAGATGCACCTGCTCATCCAGGTGTAGAGCATGTGGGAGGAGATATGTTTGAAAGTGTTCCAAGTGGTGATGCCATTTTAGTAAAGTCTATATGTCACAATTGGGCAGATGAAGACTGCATAAAATTTTTAAGAAACTGTCACAAAGCTTTGCCAGCACATGGAAAAGTGATTGTTTTGGACTATATAATTCCAGAGGTTCCGAATTCAAGTGATGCATCTAAACATAGTAGTATTGTGGACAATCACATGTTCTTGGCACATGGAGGGAGGGAAAGAACAGAGATTGAATTTGAGAACTTGTGCAAGAGCTCTGGTTTTTCCAAGTTTCAGGTTGCATGTAGTGGCATCTCAGCCACTGTAGGAGTGATGGAGTTTTACAAATAG 1110 0.4 MSSNSKENEVPLEQEKVDDAYLSAVLLCFSRVLPAVLNAAIDINLFDVIAKAKSSCDDSSFSASEIASLLPNQHPQLANRLERMLPLLTSYSLLHCSIRTNEDGKIERVYALSPVGKYFAYDDEGISVAPLSTLLHRGFHDLWKDAKGAYLDPDCNNHFENVYGMLSYQYMEKNAELNEMFYKAMAHAGPIEVKRVLKVYKGFEGLSTLVDVGGGVGETLKLIVSAYPSIKGVNFDLPQMIEDAPAHPGVEHVGGDMFESVPSGDAILVKSICHNWADEDCIKFLRNCHKALPAHGKVIVLDYIIPEVPNSSDASKHSSIVDNHMFLAHGGRERTEIEFENLCKSSGFSKFQVACSGISATVGVMEFYK* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01808 369 PIRSF O-mtase 1 369 IPR016461 GO:0008168
Lapu2g01808 369 FunFam Caffeic acid 3-O-methyltransferase 2 119 - -
Lapu2g01808 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 369 IPR016461 GO:0008168
Lapu2g01808 369 Gene3D - 1 119 IPR036388 -
Lapu2g01808 369 Pfam O-methyltransferase domain 156 349 IPR001077 GO:0008171
Lapu2g01808 369 Pfam Dimerisation domain 36 89 IPR012967 GO:0046983
Lapu2g01808 369 Gene3D Vaccinia Virus protein VP39 121 369 IPR029063 -
Lapu2g01808 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 356 IPR029063 -
Lapu2g01808 369 CDD AdoMet_MTases 208 305 - -
Lapu2g01808 369 PANTHER O-METHYLTRANSFERASE 29 357 IPR016461 GO:0008168
Lapu2g01808 369 SUPERFAMILY "Winged helix" DNA-binding domain 17 123 IPR036390 -
Lapu2g01808 369 FunFam Uncharacterized protein 120 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01808 Lapu-Chr2 31754995 31756736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01808 1 369 Monolignol Biosynthesis Gene Families AT5G54160 45.968 8.76e-110 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01808 - - gmx:106794104 573.933