Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01806 ATGGCTGCGGTTCCGTTTCCCTCAAACCTTTTGCCAGCAGATGGAAGCCCTGAATGGATGAGTAGGGCAGACAATGCATGGCAGCTTGTGGCTGCAACACTGGTGGGTCTGCAGAGTGTTCCAGGGCTCATAATATTGTATGGTGGAGCTGTGAAGAAGAAATGGGCAGTGAACTCAGCATTCATGTCACTTTACGCTTTTGCATGTGTGTTTTTCTGTTGGGTTGTGTGGGGATATAGAATGTCCTTTGGTGACAAACTTGTTCCTTTCTGGGGAAAGCCTGCCATGTCACTTGATCAGGACTATCTCTTCAAGAAGGCCTTTCTGGGGGCTTTCCCTAATGCCACGATGGTGTATTTCCAGTGTGTGTTTGCAGCCATTACTCTGATTCTCATTGCTGGGGCTGTGTTGGGGCGCATGAACTTCTATGCTTGGATGCTGTTTGTGCCTCTGTGGCTCACATTCTCATACACCTTCACAGCTTTCAGCATATGGAGTACTAATGGCTTTCTGTCCAAAATGGGGATAATAGATTACTCAGGTGGATATGTCATCCATTTGTCTTCTGGAGTTGCTGGTTTCACAGCTGCATATTGGGTTGGACCAAGGCTAAACAAGGACAGAGAAAGGTTTCCTCCAAACAACATCCTTCTGATGCTTGCAGGTGCAGGTCTGTTATGGATGGGGTGGACAGGGTTCAACGGAGGAGATCCATACACAGTGAATGCAGATGCTTCCCTTGCTGTTCTCAACACCCACGCTTGCACTGCCACCAGTTTGCTCACTTGGGTCATTCTTGATGTCATCTTTTTCCGCAAGCCTTCTGTCATTGGAGCTGTTCAAGGCATGATCACTGGTTTGGTCTGCATTACCCCTGCTGCAGGAGTTGTGCAGGGATGGGCAGCACTTTTGATGGGAGTGTTCTCTGGCTCAATTCCTTGGTTCACCATGATGGTGATCCACAAGAGATCAAAGCTTCTGCAGATGGTTGATGACACAATGGCAGTGTTCCACACTCACGCCATTGCAGGAACCCTAGGAGGACTCCTCACAGGAATGTTTGCGGAGCCAAGACTCAACAGATTGTTCTATGGAGTTCCTGGGCAATACGTTGGATTTTTCTATGGTGTCCATTCCAAGATGATCCACACAGGGTTCAGGCAAATGGGGATCCAGATCATTGGCATTGTTTTTGTCATCTTTGTCAATGTTGTCAGCACAAGCTTGATTTGCCTCTTCATCAGAATTTTTGTTCCACTGAGAATGTCTGAAGAGGATATGGAGATTGGTGATGAAGCTGCTCATGGGGAAGAGGCTTATGCCATCTGGGGTCAGGGTGATAAGCTTGAAAATTCAAGTTCAAAGTATGGAAGTTCATTGTATGATGATGTTGAAGCTGGGGCACCCAAGAAGAAACGTGGTGGCGCGGTTGAGATGATGTAA 1443 0.4733 MAAVPFPSNLLPADGSPEWMSRADNAWQLVAATLVGLQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFFCWVVWGYRMSFGDKLVPFWGKPAMSLDQDYLFKKAFLGAFPNATMVYFQCVFAAITLILIAGAVLGRMNFYAWMLFVPLWLTFSYTFTAFSIWSTNGFLSKMGIIDYSGGYVIHLSSGVAGFTAAYWVGPRLNKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYTVNADASLAVLNTHACTATSLLTWVILDVIFFRKPSVIGAVQGMITGLVCITPAAGVVQGWAALLMGVFSGSIPWFTMMVIHKRSKLLQMVDDTMAVFHTHAIAGTLGGLLTGMFAEPRLNRLFYGVPGQYVGFFYGVHSKMIHTGFRQMGIQIIGIVFVIFVNVVSTSLICLFIRIFVPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKLENSSSKYGSSLYDDVEAGAPKKKRGGAVEMM* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01806 480 PRINTS Rhesus blood group protein signature 217 235 IPR002229 GO:0005886
Lapu2g01806 480 PRINTS Rhesus blood group protein signature 121 137 IPR002229 GO:0005886
Lapu2g01806 480 PRINTS Rhesus blood group protein signature 248 270 IPR002229 GO:0005886
Lapu2g01806 480 PANTHER AMMONIUM TRANSPORTER MEP2 8 452 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lapu2g01806 480 SUPERFAMILY Ammonium transporter 19 422 - -
Lapu2g01806 480 Pfam Ammonium Transporter Family 26 440 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lapu2g01806 480 FunFam Ammonium transporter 9 443 - -
Lapu2g01806 480 NCBIfam ammonium transporter 24 440 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lapu2g01806 480 ProSitePatterns Ammonium transporters signature. 178 203 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lapu2g01806 480 Gene3D Ammonium transporter AmtB like domains 12 444 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01806 Lapu-Chr2 31731151 31733387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01806 115 474 Inorganic Solute Cotransporters AT2G38290 61.667 1.58e-146 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01806 K03320 - gmx:100787856 894.804