Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01801 ATGGCAAGAATGGAACAAACATGGGGAAATGACTGCATGGAGTTTAAGCCTGAGAGATGGATTTCAGAGGGAGGAGACATCATACACTTTCCATCTCACAAGTTCATAGCTTTCAATGCAGGCCCTAGAAGTTGTTTGGGTAAAGACATTGCTTTTACTGAAATGAAGATGGTTGCAGTTGCTATACTGTGGAGGTTTCAGATGCAGGTGGTGGATGGTCATACTATAACACCAGGAGTCTCTGTGTTACTTACCATTCAACAAAGCTTGAAGACTGTGGAGAAGATGAGTTCACGATCCTTGAGAGGAAACCGCCAGAGGAAGACGTTGCAGCTCGACCTCAACCTCGTGCCACCAGCAGAAGAGAATCATGTCCAAAATGATGTTCTTCCAAATCAGAATGAGAATGATGATGATGATGATGTGGTTGAACTGTCACCAACTACATTTGCTCAGGCTCGCAGCAATCAGAGGAAGAGGATTCACAGGAGGAGCATTTATGATATAGATGAAGAGACTGGAGAATTGCCAAAAGAGATAGTAATTGACGGAAAAGTCTACAGAACTGTGGAAACTGGTAGCAGTTCTAAGGATGAAAAAGCAAAGTCACCTGAACGTCCCAAAACACCTGAACGTCCTAAGACACCTGAACCTCCTAAGTCACCTGAACCTCCAAAGAAGCCACCTGCACTTGATTGTCCAATATGCATGGCTCCTTTTGTAGAACCCATGTCTACCAGGTGTGGTCATATTTTTTGCAAGGCTTGCATTCACACTGCAATATCCACACAGGGTAAATGCCCTACCTGCAGAAAGAAGGTTTCAAAGAAACAACCAATAAGGGTGTTTCTTCCATCTCTCACTTGA 867 0.4383 MARMEQTWGNDCMEFKPERWISEGGDIIHFPSHKFIAFNAGPRSCLGKDIAFTEMKMVAVAILWRFQMQVVDGHTITPGVSVLLTIQQSLKTVEKMSSRSLRGNRQRKTLQLDLNLVPPAEENHVQNDVLPNQNENDDDDDVVELSPTTFAQARSNQRKRIHRRSIYDIDEETGELPKEIVIDGKVYRTVETGSSSKDEKAKSPERPKTPERPKTPEPPKSPEPPKKPPALDCPICMAPFVEPMSTRCGHIFCKACIHTAISTQGKCPTCRKKVSKKQPIRVFLPSLT* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01801 288 ProSitePatterns Zinc finger RING-type signature. 248 257 IPR017907 -
Lapu2g01801 288 SUPERFAMILY RING/U-box 232 278 - -
Lapu2g01801 288 SMART ring_2 233 270 IPR001841 -
Lapu2g01801 288 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 38 47 IPR017972 GO:0005506|GO:0016705
Lapu2g01801 288 MobiDBLite consensus disorder prediction 191 228 - -
Lapu2g01801 288 Pfam Zinc finger, C3HC4 type (RING finger) 233 270 - -
Lapu2g01801 288 PANTHER ELFLESS, ISOFORM B 94 285 - -
Lapu2g01801 288 Pfam Cytochrome P450 3 77 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g01801 288 Gene3D Cytochrome P450 1 101 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g01801 288 SUPERFAMILY Cytochrome P450 1 85 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g01801 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 184 286 IPR013083 -
Lapu2g01801 288 MobiDBLite consensus disorder prediction 120 142 - -
Lapu2g01801 288 MobiDBLite consensus disorder prediction 192 221 - -
Lapu2g01801 288 ProSiteProfiles Zinc finger RING-type profile. 233 271 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01801 Lapu-Chr2 31685652 31691817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01801 1 95 Cytochrome P450 AT4G39480 56.250 9.39e-31 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01801 - K22651 vra:106753569 159.844