Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01793 ATGAACTCTCTATTTTCGCCTGAAAACCTTCCTCCACCGCCTGGATTCCCTGCCTCAATCGCGGCAGCCACAGCCACCACCAGCACCTCCCCAACCCCAGCACTGATCCCAAAGCTCGAACCTTTCGACGAATGGCGCAACACCCCCACTTCCCAACAACAACAACAATCTCAGGACCCCAATTTTTCAAATGGGTCCCTCGACCTCGACCTCAATCTCTTATGCGACGGAACCTCCCACGACCCAAATAACAACTTGTTCTCCGAGTTCAACAGAATTTCCCAGCTTTTCCGCACGGCGTTCTCCCCCGATGACCCCCAGAACGACGCCGTTCCCGACCCCATCACGGAAAGCCTGCAACAACTCCGAAACGACGCCTTTTCCAACCCCTTTGCTGAAAACCCGCAGCACTTCCAAAATGGCGCTGTTTCGAACCCCGGGCTGCAGCAGGGCCGAAGCGGCACCGTTCCGGACCCGGATTCGCGGGCAATTGTGCCCGTCCCGGAGGAGGGGCGGTCCTCTTCGATTATGGCGGCAACCACGCCGCGGCGTCGGTTTAAGGAGCTGGTTCGGGTGGCGGATCTTGGCGGGCCGGACCGGCAGCACTTCCGGGACGTTGTCCAGCGGACTAGGAGGCTGTATGACTCGCTGCGCGTGCTGGCGACGGTGGAGGACGAGCGGCGGGTGGACGCCCGCAGGGGGCGCAGCGATTTGCGAGCCTCGGCCTTGATGAGGAACTGTGGTTTGTGGTTGAATCGTGACAAGAGAATTGTTGGTGCAATTCCTGGTATTTGCGTTGGTGATGTGTTCCTCTACAGGATGGAGTTGTGTGTAGTTGGCTTGCATGGTCATCCTCAGGCTGGCATTGATTATCTTCCCGCCAGCATGAGTTCCAATGGCGAACCGATTGCCACCAGTGTGATTGTCTCTGGTGGTTATGAGGATGATGTTGATGAGGGTGATGTTATCACTTACTCTGGCCATGGTGGCCAGGACAAGAATTCTCGGCAGGTTTGTCACCAGAAGCTCGAGGGAGGGAACCTTGCCATGGAGCGGAGTAAGTACTATGGGATTGAGGTGAGGGTCATTCGCGGGGTGCGCTATGAGGGTGCAGCCTCTGCCACTGGGAAGTTGTATGTGTATGATGGGTTGTATAGAATTGTTGATTGCTGGTTTGATGTTGGGAAGTCTGGTTTCGGTGTTTTTAAGTATAGGCTGTGTAGGATTGAGGGGCAAGCTAAGATGGGGAGCGTGATGATGAAGGAGGCTCAAATGCTTAAGAAGGATCCCTTGAGTTTCAAACCCATGTGTTGTGTCTCTATTGATATTTCAAACAGGAACGAGAACGTGGGGGTTCGGCTTTTCAATGACATCGATCGCAACTTCGACCCTCTCCGGTATGATTATCTTGTGAAGACAAATTTTCCTGAGTTTGTGTTTCACCAGACTGGGAGGGGTACGGGTTGCGACTGTGTGGACGGTTGTGTTGAAGGGTGCTTCTGTGCTATGAAGAACGGAGGGGAGTTTCCCTACAATCAGAGTGGGATTCTCTTGAAAGGGAAGCCTTTGGTTTTTGAGTGTGGCCCATTTTGTCGTTGTCCTCCTCATTGTCGGAATCGGGTCACACAGAAGGGGCTGAAAAATAGGTTGGAGGTGTTTAGATCCAGGGAAACTGGTTGGGGAGTTAGGTCGTTGGACCTTATTCAAGCTGGTGCTTTTATATGTGAGTACACAGGTGTTGTGCTGACTAGGGAGCAAGCAGAGCTTTTGTCAATGAATGGTGATTCCTTGATATACCCGAATCGGTTTACTGATAGGTGGTCTGAATGGGGTAACTTATCTATGATAGACTCCAATTATGTGCGTCCATCTTATCCTTCCATCCCACCTTTGGATTTTGCTATGGATGTGTCAAGAATGAGGAATGTTGCTTGTTATATGAGTCATAGTTCCACCCCCAATGTATTGGTTCAGTTTGTCCTGTATGATCACAATAATTTGATGTTCCCTCACCTTATGCTGTTTGCAATGGAGAACATCCCTCCCATGAGAGAGCTCAGCCTTGATTATGGGGTAGCTGACGAGTGGACTGGGAAGCTCTCTATATGTAGCTGA 2115 0.5173 MNSLFSPENLPPPPGFPASIAAATATTSTSPTPALIPKLEPFDEWRNTPTSQQQQQSQDPNFSNGSLDLDLNLLCDGTSHDPNNNLFSEFNRISQLFRTAFSPDDPQNDAVPDPITESLQQLRNDAFSNPFAENPQHFQNGAVSNPGLQQGRSGTVPDPDSRAIVPVPEEGRSSSIMAATTPRRRFKELVRVADLGGPDRQHFRDVVQRTRRLYDSLRVLATVEDERRVDARRGRSDLRASALMRNCGLWLNRDKRIVGAIPGICVGDVFLYRMELCVVGLHGHPQAGIDYLPASMSSNGEPIATSVIVSGGYEDDVDEGDVITYSGHGGQDKNSRQVCHQKLEGGNLAMERSKYYGIEVRVIRGVRYEGAASATGKLYVYDGLYRIVDCWFDVGKSGFGVFKYRLCRIEGQAKMGSVMMKEAQMLKKDPLSFKPMCCVSIDISNRNENVGVRLFNDIDRNFDPLRYDYLVKTNFPEFVFHQTGRGTGCDCVDGCVEGCFCAMKNGGEFPYNQSGILLKGKPLVFECGPFCRCPPHCRNRVTQKGLKNRLEVFRSRETGWGVRSLDLIQAGAFICEYTGVVLTREQAELLSMNGDSLIYPNRFTDRWSEWGNLSMIDSNYVRPSYPSIPPLDFAMDVSRMRNVACYMSHSSTPNVLVQFVLYDHNNLMFPHLMLFAMENIPPMRELSLDYGVADEWTGKLSICS* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01793 704 Pfam SAD/SRA domain 258 412 IPR003105 -
Lapu2g01793 704 ProSiteProfiles Pre-SET domain profile. 487 545 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu2g01793 704 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 155 692 - -
Lapu2g01793 704 SMART preset_2 440 532 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu2g01793 704 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 102 703 IPR025794 GO:0016571
Lapu2g01793 704 MobiDBLite consensus disorder prediction 131 166 - -
Lapu2g01793 704 Gene3D SET domain 417 704 IPR046341 -
Lapu2g01793 704 Gene3D - 256 416 IPR036987 -
Lapu2g01793 704 MobiDBLite consensus disorder prediction 131 156 - -
Lapu2g01793 704 Pfam SET domain 559 691 IPR001214 GO:0005515
Lapu2g01793 704 SMART G9a_1 254 412 IPR003105 -
Lapu2g01793 704 SUPERFAMILY SET domain 432 703 IPR046341 -
Lapu2g01793 704 ProSiteProfiles YDG domain profile. 259 408 IPR003105 -
Lapu2g01793 704 SMART set_7 548 697 IPR001214 GO:0005515
Lapu2g01793 704 SUPERFAMILY PUA domain-like 240 422 IPR015947 -
Lapu2g01793 704 MobiDBLite consensus disorder prediction 1 65 - -
Lapu2g01793 704 MobiDBLite consensus disorder prediction 45 65 - -
Lapu2g01793 704 Pfam Pre-SET motif 443 540 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu2g01793 704 ProSiteProfiles SET domain profile. 548 691 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01793 Lapu-Chr2 31609662 31614033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01793 186 693 Su(var)3-9 homologs AT5G04940 37.380 8.22e-102 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu2g01793 SAD_SRA 6.9e-47 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01793 K11420 - gmx:100795514 1182.16