Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01788 ATGGGTAGTTGTGGAAGGGAAGGTGTAGTGAGACAGTATATAAGATCAAAAGTCCCTCGTTTAAGATGGACCCCTGAACTGCATCGTTGCTTTGTTTATGCCATTGAAACTCTTGGAGGTCATCACAAGGCTACTCCTAAGCTTGTTCTTCAACTGATGGATGTTAAAGGGCTCACAATTTCACATGTCAAGAGCCATCTGCAGATGTACAGAAGCATGAAAAGTGATTCCTGCAGACAAGACAAGACTTCCACCCAACATAGAAAACAATACTTTCAGGAGCATGATGAGGAAGTGAATGATATTGATTTTCACTCTTGCTTAAAATCAATTGGAAAAGAATCTGATTCCCAGCCCTGCAGCAGTAATTTCTCCCTGAAAAGAGCTAGAATCGAGAAGACAAGTTTACTCTCAGGATTCCTACAATGCAGCCAAAGAATATGTGAAGCAGTCCCAAATCCACACACTACTTTTTATGATTACCTGCAGAGCATGGCTGAGCAGAAGGGAATAAAGAAGATTTGTGTTGGTTCAATATTGCAGACTCAACCCCTTTCCACAACCATGCTACCAAAGCAAGAATCAGATTTGCTCCAGGTTGCCTACTTAAATGATAAACAGGCTATGAATGAAGTTGGGAAGAGTTGGAGGGTACAAGCAGAGGATGAAGACATGGGAGGTTGTGAGTTGTCATTGTCCATCTCTTTGCCACAGCCACATCCTTCTTCTCAGAAAAGTAATGCTTCTTCAGTCAGTGAGACCAGTGAGGCCTTTTCACTATGCCCTAAGTTTAGCAGCAACAACTACATGGGCTGTTCTAGTTCTTCTAATGTTCCAAACACACTTAATTTGGACCTATCTTTGGCCATTTGA 873 0.4192 MGSCGREGVVRQYIRSKVPRLRWTPELHRCFVYAIETLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMKSDSCRQDKTSTQHRKQYFQEHDEEVNDIDFHSCLKSIGKESDSQPCSSNFSLKRARIEKTSLLSGFLQCSQRICEAVPNPHTTFYDYLQSMAEQKGIKKICVGSILQTQPLSTTMLPKQESDLLQVAYLNDKQAMNEVGKSWRVQAEDEDMGGCELSLSISLPQPHPSSQKSNASSVSETSEAFSLCPKFSSNNYMGCSSSSNVPNTLNLDLSLAI* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01788 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Lapu2g01788 290 FunFam Myb family transcription factor 17 75 - -
Lapu2g01788 290 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 15 117 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lapu2g01788 290 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Lapu2g01788 290 Gene3D - 18 75 - -
Lapu2g01788 290 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 73 IPR006447 GO:0003677
Lapu2g01788 290 SUPERFAMILY Homeodomain-like 17 74 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01788 Lapu-Chr2 31521643 31526033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01788 1 74 G2-like Transcription Factor Family AT1G14600 70.886 7.19e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu2g01788 Myb_DNA-binding 1.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01788 - - gmx:100796564 480.33