Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01778 ATGATTGATTCAAATAAAGGGTCTCCCTTCAACCTCACTGAAGCAGTACTTTCATCCGTGTATAACATCATTTCAAGAGCTGCGTTTGGCATGAAATCCAACCAGGAACAGTTCATTTCAGTGGTAAAAGAAGCAGTGCAACTTGCTGGAGGTTTTGATATAGGAGATCTATTTCCTTCTGCTAAATGGCTTCAACTTGTTACTGGTTTTAGGCCTAAGCTTGAGAAGCTGCATGAACAAGTTGATCGGATATTAGTAGATATCATCAATGAACACAAAAGGCAAAAGTCAAAGGATCAAGAGGGCCGAGGTGAAACAAATGAAAATTTGCTAGATGTTCTTCTAAAATTCCAGGATGGTAATGGTAGCAACCAGAACATTTGCTTAACAATGAACAACATCAAAGCTATAATCCTGGACATGTTTAGTGCAGGAGGTGAGACATCATCCACTACCATAATGTGGGCAATGTCTGAGTTGATAAGGGATCCAAGAGTAATGAACAAAGCACAGATTGAGGTGAGAGAGGCATTCGATAAGAAAGGAAGGGTTGATGAAGTTTGCATGGATGATGAATTCAAATATTTGAAATCAGTTGTGAAAGAAACCCTAAGGTTACATCCACCACTTCCTCTTTTACTTCCCAGAGAATATGGACACCCATGTGAGATTAAAGGGTATCATACACCAGCCAAAGTTAAGGTAATTGTGAATGCTTGGGCAATTGGAAGAGATTCAAACTACTGGATTGAACCTGAGAGGTTTTATCCAGAGAGATTCACTGATAGCCCTATCGACTATAGAGGGACTAATTTTGAGTACATTCCATTTGGTTCTGGAAGAAGAATATGCCCAGGAAGCACCTTTGGTTTGATAAATGTTGAGCTGACACTTGCATTTTTGTTGTATCATTTTGATTGGAAGCTTCCAAATGGAATGAAAAGTGAGGAGTTGGACATGACTGAGCAATTTGGAGTTACTGTTTTTAAAAAAGAAGACTTATATTTGATACCAGTCACTGCTCGACCAAATCCTGGTAAGATAAACCATACAAGAAGAATATGCATGAAAAAGTACCATCCCCACATGATGTGTTCATTGTGGTTACCATCTTATTTTAACTCTCTTCATCAGTACCATTCATAA 1146 0.3857 MIDSNKGSPFNLTEAVLSSVYNIISRAAFGMKSNQEQFISVVKEAVQLAGGFDIGDLFPSAKWLQLVTGFRPKLEKLHEQVDRILVDIINEHKRQKSKDQEGRGETNENLLDVLLKFQDGNGSNQNICLTMNNIKAIILDMFSAGGETSSTTIMWAMSELIRDPRVMNKAQIEVREAFDKKGRVDEVCMDDEFKYLKSVVKETLRLHPPLPLLLPREYGHPCEIKGYHTPAKVKVIVNAWAIGRDSNYWIEPERFYPERFTDSPIDYRGTNFEYIPFGSGRRICPGSTFGLINVELTLAFLLYHFDWKLPNGMKSEELDMTEQFGVTVFKKEDLYLIPVTARPNPGKINHTRRICMKKYHPHMMCSLWLPSYFNSLHQYHS* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01778 381 SUPERFAMILY Cytochrome P450 4 338 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g01778 381 Gene3D Cytochrome P450 1 353 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g01778 381 PANTHER OS08G0105600 PROTEIN 2 341 - -
Lapu2g01778 381 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 277 286 IPR017972 GO:0005506|GO:0016705
Lapu2g01778 381 FunFam Os06g0641600 protein 31 337 - -
Lapu2g01778 381 PRINTS P450 superfamily signature 144 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g01778 381 PRINTS P450 superfamily signature 198 209 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g01778 381 PRINTS P450 superfamily signature 284 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g01778 381 PRINTS P450 superfamily signature 275 284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g01778 381 PRINTS E-class P450 group I signature 19 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g01778 381 PRINTS E-class P450 group I signature 238 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g01778 381 PRINTS E-class P450 group I signature 153 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g01778 381 PRINTS E-class P450 group I signature 274 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g01778 381 PRINTS E-class P450 group I signature 133 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g01778 381 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g01778 381 PRINTS E-class P450 group I signature 284 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g01778 381 Pfam Cytochrome P450 3 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01778 Lapu-Chr2 31441694 31443750 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01778 4 339 Cytochrome P450 AT3G26300 42.151 1.05e-89 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01778 - - gmx:102665189 527.324