LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu2g01773	ATGCCTCTCTATATGTGGCCAAATCAGGCGAACAGCACACTACTTCAATCTGATGTTTTACAGGATCCAGTGAAGCTCTCCTCTAAACCTATAGTATCTGAGGATGCTGCACTGGCTTTTTCAGAAATAGTACACAGGACTTTTGGCGAGCAAAACCTGAATTCAATAAAAAAATGTGCTAGAAACTTACAACCTAAAAGTTTAATACCTAAAGAATCAGGAGAAGATGGAAGCAAATCTTTGATACTGAAAAACAACACAGATGGAGTGTTGTGCAGTGAAGAAAATGGAAACAAGGGATCACTAGATGAAGACCATGACACTGCTAATGATTTTCCTTCAACTAAGAAGCAACACTGTAATCTGATGCTTGAAAATGCAAGTTCAACCCAACTGAATCAGGATTTGGAGACGGGCCTAGATGCATTTGGCACTAATACTCAACTTGTGAAGTTGGAAAAGGATGAAATAAGAAGAGAAAGAAAAAGACAGTCGAACAGGGAATCGGCTAGGAGATCAAGGATGCGGAAAGAGAAAGAATGTGAAGAGCTACATAAAAAAATGGAAATTCTTAAGGATGAAAACTCCATGCTTACGCAGAGGCTCAAGAGTCTTTCCGAGGAATGTCTGGAGATATGCAATGAAAATGATGCCATAGAGGAAGAGCTGGTTAAGATGTATGGACCAGAGTCAATAGCAGCTATGTTGGCCATGAAGCCATGCTAA	726	0.3994	MPLYMWPNQANSTLLQSDVLQDPVKLSSKPIVSEDAALAFSEIVHRTFGEQNLNSIKKCARNLQPKSLIPKESGEDGSKSLILKNNTDGVLCSEENGNKGSLDEDHDTANDFPSTKKQHCNLMLENASSTQLNQDLETGLDAFGTNTQLVKLEKDEIRRERKRQSNRESARRSRMRKEKECEELHKKMEILKDENSMLTQRLKSLSEECLEICNENDAIEEELVKMYGPESIAAMLAMKPC*	242

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu2g01773	241	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	156	208	IPR004827	GO:0003700\|GO:0006355
	Lapu2g01773	241	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	161	176	IPR004827	GO:0003700\|GO:0006355
	Lapu2g01773	241	Gene3D	-	157	214	-	-
	Lapu2g01773	241	Coils	Coil	167	222	-	-
	Lapu2g01773	241	MobiDBLite	consensus disorder prediction	157	180	-	-
	Lapu2g01773	241	CDD	bZIP_plant_GBF1	159	209	IPR045314	GO:0003700\|GO:0006355
	Lapu2g01773	241	PANTHER	G-BOX-BINDING FACTOR 3-RELATED	67	229	IPR044827	GO:0003700\|GO:0006355\|GO:0043565
	Lapu2g01773	241	SUPERFAMILY	Leucine zipper domain	157	212	IPR046347	GO:0003700\|GO:0006355
	Lapu2g01773	241	Pfam	bZIP transcription factor	155	211	IPR004827	GO:0003700\|GO:0006355
	Lapu2g01773	241	SMART	brlzneu	154	218	IPR004827	GO:0003700\|GO:0006355

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu2g01773	75	233	bZIP Transcription Factor Family	AT4G36730	35.632	5.47e-26	101

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Lapu2g01773		bZIP_1	3e-15	CL0018

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu2g01773	K09060		-	gmx:102665715	400.208