Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01763 ATGATGAGGATGCAAGGGCACGATCTGCCCATTATTCACTTCATTGTTGAATTTCCCAATCTTATAAGGATTCCTGATAATTTTCTGAGGAAATATGGGACCCAGCTTTCGACAATTGCTACCCTCACGGTTCCTGATGGTAGTATTTGGCGTATAGGATTGAAGAAAGCGGAAAACAAAATTTGGTTTGTTGATGGTTGGCAAGATTTTGTTCAACGGTATTCTGTTGGTGTTGGATACTTTTTGGTGTTCATGTATGAAGGGAATTCGTCCTTCATTGTTCATATTTTTAATTTGAGTACCTCTGAGGTAAATTATCAATCAGCCATGAGAAACCATATTGAAGGACCTTGCTTTGCCAATTACAATAATATTTTTGAGGAAATGGAAGATATAGACTCCATTGATTTGTCAGATTTGTCACCTCCGTACCTTACGTCTGGTGCCATGCAAAACAAGGGTTTTGCAGGATCTGTAGATCAACTGACACCTGTGAAGAGTCATACTCCCGCTTTGCAGAATTTGTTCAATGGTGGATCAAAACTCAATCGCGTAAACTGGGGTGATGGTGGGAGTGCTTATTCTTCTAAGGGTGCCAATTCACAAGGCACTCAGTCAACCAGAGACATAGGTGTTCAGTTTAATGCTGTTGAGTTTAAAAGGTCCACTGAAGAATTGAAATTGCGTTATTCTAATGAGGAAGCAGTTAATAAAACTGCAAAAAAGAAGCGGAAATCAGAGTCCCAGGGCGAGGAACCCTCCGGTGATAATGAAGAGGAGGCAGAAATGCGCTATAGGTTTTATGAAAGTGCATCTGCAAGGAAAAGAACAGTGACAGCAGAAGAAAGAGAAAGGGCAATTAATGCATCAAAAGCATTTGAACCCACTAATCCTTTCTGCAGAGTTGTCCTGCGACCCTCCTATTTATATAGAGGATGCATCATGTACTTGCCTTCATGCTTTGCAGAGAAGAATCTGAATGGGGTATCAGGATTCATTAAACTTCAATTGGCCAATGGCAGACAGTGGTCCGTTCGCTGTCTCTACAGAGGAGGTCGAGCCAAGTTGAGTCAAGGATGGTTTGAATTCACAGTGGAGAACAATTTGGGGGAAGGTGATGTATGTGTGTTTGAGCTCCTTAGAACGAAAGAAGTTGTGCTGCAAGTCACTGTGTTTCGTGTAACTGAGGATGCAGGGTTGTTGAACTCTCCTCCTCATCCTATGCAGCAGCAGAGCCAAAATATGAGCCACACCAAACTCTTAAACCCTCATTTGCAGCATCGCGTTAGCAGTACAGCCAAAATGATTAGAAATTAG 1317 0.4191 MMRMQGHDLPIIHFIVEFPNLIRIPDNFLRKYGTQLSTIATLTVPDGSIWRIGLKKAENKIWFVDGWQDFVQRYSVGVGYFLVFMYEGNSSFIVHIFNLSTSEVNYQSAMRNHIEGPCFANYNNIFEEMEDIDSIDLSDLSPPYLTSGAMQNKGFAGSVDQLTPVKSHTPALQNLFNGGSKLNRVNWGDGGSAYSSKGANSQGTQSTRDIGVQFNAVEFKRSTEELKLRYSNEEAVNKTAKKKRKSESQGEEPSGDNEEEAEMRYRFYESASARKRTVTAEERERAINASKAFEPTNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLNGVSGFIKLQLANGRQWSVRCLYRGGRAKLSQGWFEFTVENNLGEGDVCVFELLRTKEVVLQVTVFRVTEDAGLLNSPPHPMQQQSQNMSHTKLLNPHLQHRVSSTAKMIRN* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01763 438 PANTHER B3 DOMAIN-CONTAINING 17 387 - -
Lapu2g01763 438 ProSiteProfiles B3 DNA-binding domain profile. 7 100 IPR003340 GO:0003677
Lapu2g01763 438 CDD B3_DNA 298 393 IPR003340 GO:0003677
Lapu2g01763 438 MobiDBLite consensus disorder prediction 234 261 - -
Lapu2g01763 438 SMART B3_2 300 395 IPR003340 GO:0003677
Lapu2g01763 438 SMART B3_2 14 100 IPR003340 GO:0003677
Lapu2g01763 438 Gene3D - 14 101 IPR015300 -
Lapu2g01763 438 Pfam B3 DNA binding domain 21 98 IPR003340 GO:0003677
Lapu2g01763 438 Pfam B3 DNA binding domain 303 393 IPR003340 GO:0003677
Lapu2g01763 438 Gene3D - 277 397 IPR015300 -
Lapu2g01763 438 MobiDBLite consensus disorder prediction 234 252 - -
Lapu2g01763 438 SUPERFAMILY DNA-binding pseudobarrel domain 17 99 IPR015300 -
Lapu2g01763 438 CDD B3_DNA 4 98 IPR003340 GO:0003677
Lapu2g01763 438 ProSiteProfiles B3 DNA-binding domain profile. 300 395 IPR003340 GO:0003677
Lapu2g01763 438 SUPERFAMILY DNA-binding pseudobarrel domain 293 394 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01763 Lapu-Chr2 31311715 31317927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01763 22 399 B3 DNA Binding Superfamily AT3G18990 49.871 1.04e-119 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lapu2g01763 B3 2.2e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01763 - - gmx:100806715 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01763 2 31311715 31317927 Lapu2g01763 2 31311715 31317927 ECH