Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01753 CATGGCAGAGTAGAGATAATCCACAACCAGCAAGGCAATAAAACCACACCTTCTTTTGTTGCCTTCACAGACAGACTGAGATTGATTGGTGAAGCTGCTAAGAATCAGACTGTCACCAATCCTGAAAACACTGTTTTTGATGCTAAGAGGTTAATTGGTAGGAAATTCAGTGATGACATTATTCAAAAAGAGAAAATGTTATGGCCATTCAAGGTTGTTGCTGGTGTTAATGACAAGCCTATGATCGTGGTTAAATACAAGGGTCAGGAGAAGCGTCTCTGTGCTGAAGAAATCTCATCTATGGTTCTCGTGATGATGCGGGAGATTGCTGAGGCGTATTTGGAATCTACTGTGAAGAATGTTGTTGTCACTGTCCCTGCTTATTTCAATGACTCTCAACGTAAAGCCACCAAAGATGCTGGTGCCATTGCTGGCCTCAATGTTATGAGGATAATCAATGAGCCTACTGCTGCAGCTATTGCATATGGCCTTGACAAGAGGACTAACTGTGTTGGGAAGCGAAATGTTTTCATTTTTGATCTTGGTGGGGGTACTTTTGATGTGTCTCTCATCACAATTGAGCACAAGGTCTTCCAAGTTAGGGCCACTGCTGGAAACACTCATCTAGGGGGAGAGGATTTTGACAATAGAATGGTGAACTACTTTGTGAAGGAGTTCAAAAGTAAGAACAAAGTGGATATTAGTGGGGACCCAAGAGCCCTAAGGAGGTTGAGAACTGCCTGTGAGAGGGCAAAAAGGATACTCTCATATGATGTCACTGCAAACATCGAGTTAGACGCCTTATTTAAGGGCATTGACTTCTGCTTCTCAATCACTCGTGCTAAGTTTGAGGGAATTAATATGGAGCTTTTTGAAGAGTGTATGGAGACAGTTGATATATGTCTTACTTATGCTAAGATGGACAAGAGTAGTGTAGATGATGTTGTCCTTGTTGGTGGTTCTTCTAGGATTCCAAAAGTGCAGGAACTATTGCAGAACTTTTTTGATGGAAAAGATCTGTGCAAGAGCATCAACCCTGACGAGGCTGTTGCTTATGGTGCAGCTGTTCAGGCTGCTTTGTTGAGTGAAGGCATGAAGAATGTTCCAAACTTGGAGCTACAGGATGTTACACCTCTATCTCTT 1143 0.4243 HGRVEIIHNQQGNKTTPSFVAFTDRLRLIGEAAKNQTVTNPENTVFDAKRLIGRKFSDDIIQKEKMLWPFKVVAGVNDKPMIVVKYKGQEKRLCAEEISSMVLVMMREIAEAYLESTVKNVVVTVPAYFNDSQRKATKDAGAIAGLNVMRIINEPTAAAIAYGLDKRTNCVGKRNVFIFDLGGGTFDVSLITIEHKVFQVRATAGNTHLGGEDFDNRMVNYFVKEFKSKNKVDISGDPRALRRLRTACERAKRILSYDVTANIELDALFKGIDFCFSITRAKFEGINMELFEECMETVDICLTYAKMDKSSVDDVVLVGGSSRIPKVQELLQNFFDGKDLCKSINPDEAVAYGAAVQAALLSEGMKNVPNLELQDVTPLSL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01753 381 SUPERFAMILY Actin-like ATPase domain 2 166 IPR043129 -
Lapu2g01753 381 Gene3D - 2 359 - -
Lapu2g01753 381 FunFam Heat shock 70 kDa protein 46 101 - -
Lapu2g01753 381 Gene3D - 167 341 - -
Lapu2g01753 381 ProSitePatterns Heat shock hsp70 proteins family signature 2. 178 191 IPR018181 -
Lapu2g01753 381 FunFam Heat shock 70 kDa 210 293 - -
Lapu2g01753 381 Gene3D Actin; Chain A, domain 4 210 293 - -
Lapu2g01753 381 Pfam Hsp70 protein 2 381 IPR013126 GO:0005524|GO:0140662
Lapu2g01753 381 ProSitePatterns Heat shock hsp70 proteins family signature 3. 315 329 IPR018181 -
Lapu2g01753 381 Gene3D - 46 101 - -
Lapu2g01753 381 PRINTS 70kDa heat shock protein signature 370 381 - -
Lapu2g01753 381 PRINTS 70kDa heat shock protein signature 184 194 - -
Lapu2g01753 381 PRINTS 70kDa heat shock protein signature 344 364 - -
Lapu2g01753 381 PRINTS 70kDa heat shock protein signature 33 41 - -
Lapu2g01753 381 PRINTS 70kDa heat shock protein signature 11 23 - -
Lapu2g01753 381 PRINTS 70kDa heat shock protein signature 121 141 - -
Lapu2g01753 381 PRINTS 70kDa heat shock protein signature 312 328 - -
Lapu2g01753 381 FunFam Molecular chaperone DnaK 1 173 - -
Lapu2g01753 381 SUPERFAMILY Actin-like ATPase domain 173 361 IPR043129 -
Lapu2g01753 381 PANTHER HEAT SHOCK PROTEIN 70KDA 4 381 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01753 Lapu-Chr2 31219313 31220951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01753 1 381 Calmodulin-binding Proteins AT3G12580 74.084 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01753 K03283 - gmx:102667578 632.869