Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01752 ATGGATCGTTCTGCGATGACTGTTGGGCCAGGAATGGATATGCCAATCATGCATGACAGTGATAGGTATGAGCTGGTCCGTGATATTGGGTCGGGGAATTTTGGGGTGGCCAGGCTCATGAGGGACAAGCACACTGAAGAGCTTGTTGCTGTGAAGTATATTGAGAGAGGTGAAAAGATAGATGAAAATGTACGAAGGGAAATTATAAATCACAGATCACTGAGGCATCCCAATATTGTCAGGTTCAAGGAGGTTTGTTCTCTGAACTCTGTCATACTAACCCCTACACATTTGGCTATTGTGATGGAATATGCTTCTGGAGGAGAGCTATTTGAGCGGATTTGCAAAGCAGGACGATTTGGTGAAGATGAGGCACGCTTCTTCTTCCAACAACTTATTTCAGGGGTTAGCTTCTGTCATGCAATGCAAGTATGCCATCGTGACTTGAAGTTGGAGAACACATTGTTGGATGGTAGTCCAGCTCCTCGTTTGAAGATTTGTGATTTCGGGTATTCAAAGTCCTCTGTACTACATTCACAACCAAAATCTACAGTTGGTACCCCTGCATACATTGCTCCTGAAGTTTTGCTTAAGAAAGAATATGATGGCAAGATTGCAGATGTGTGGTCCTGTGGGGTGACCTTATATGTCATGTTGGTGGGTGCATATCCTTTTGAGGATCCAGAGGAACCTACAAATTTCCGCAAGACGATTCAGAGGATTTTGAAAGTCCAGTACTCAATTCCTGATTATGTTCATATATCTCCAGAATGTCGTCATCTAATCTCAAGGATCTTTGTCGCAGATCCTGCACAGAGAATAACTATTCCTGAGATTCAAAGCCACGAGTGGTTTTTGACAAACCTTCCGGCCGATCTGATGGTGGACAACACAAGGAGCAACCAGTTTGAGGAGCCTCATCAACCAATGCAGAGCATTGAAGATATCATGCAGATAATTAGAGAGGCTACAATTCCTGGAGCCAAAACTCAGTCTCTCAACCAGTATCTCACTGGTAGCTTGGACATGGATGATGATGACATGGATGAGGACCCAGAGACGGATTCTGACCTTGATATTGATAGCAGTGGAGAAATAGTTTATGCAATGTAA 1113 0.4367 MDRSAMTVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKHTEELVAVKYIERGEKIDENVRREIINHRSLRHPNIVRFKEVCSLNSVILTPTHLAIVMEYASGGELFERICKAGRFGEDEARFFFQQLISGVSFCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPTNFRKTIQRILKVQYSIPDYVHISPECRHLISRIFVADPAQRITIPEIQSHEWFLTNLPADLMVDNTRSNQFEEPHQPMQSIEDIMQIIREATIPGAKTQSLNQYLTGSLDMDDDDMDEDPETDSDLDIDSSGEIVYAM* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01752 370 MobiDBLite consensus disorder prediction 342 360 - -
Lapu2g01752 370 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Lapu2g01752 370 Pfam Protein kinase domain 23 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01752 370 SUPERFAMILY Protein kinase-like (PK-like) 15 309 IPR011009 -
Lapu2g01752 370 Gene3D Transferase(Phosphotransferase) domain 1 105 293 - -
Lapu2g01752 370 PANTHER SERINE/THREONINE KINASE 22 316 - -
Lapu2g01752 370 ProSiteProfiles Protein kinase domain profile. 23 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01752 370 SMART serkin_6 23 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01752 370 FunFam Serine/threonine-protein kinase SRK2E 105 293 - -
Lapu2g01752 370 MobiDBLite consensus disorder prediction 339 363 - -
Lapu2g01752 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Lapu2g01752 370 FunFam Serine/threonine-protein kinase SRK2E 14 104 - -
Lapu2g01752 370 Gene3D Phosphorylase Kinase; domain 1 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01752 Lapu-Chr2 31210603 31216069 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01752 22 296 CBL-interacting serine-threonine protein kinases AT5G25110 43.750 2.99e-68 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lapu2g01752 Pkinase 2.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01752 K14498 - gmx:100804702 666.766