Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01735 ATGACTGTGGATGAAGTGGAGAGTAGCTCTGAGTGGAGCAGAGAGCAGGATAAAGCATTTGAAAATGCCTTGGCAACTCATCCAGAGGATGCTTCAGATCGATGGGAGAAGATTGCAGCTGACGTGCCGGGGAAGACTATAGAAGAAATCAAACAGCATTATGAGCTGTTGGTTGAAGATGTTAATCAGATTGAATCTGGTTGTGTGCCTTTACCATCTTATAATTCTTCTTCAGAGGGCTCAACAAGCCATGCTAGTGATGAAGGAGCTGGCAAAAAGGGCAGCGGTCTTGGGAACTGTAACAGTGAGTCTAATCATGGAACTAAGGCTTCAAGATCAGATCAAGAAAGACGGAAGGGGATTGCTTGGACTGAGGATGAACACAGGTTATTTCTTCTGGGCTTGGATAAGTATGGGAAAGGTGACTGGCGAAGCATATCAAGGAACTTCGTGGTGACAAGAACACCTACACAAGTTGCAAGCCATGCACAAAAGTACTTCATTCGATTGAACTCGATGAACAAAGATAGAAGGCGATCCAGCATACATGATATCACCAGCGTTAACAATGGTGACGTGTTAGCTCCACAAGGACCGATTACCGGTCAGACGAATGGTGCTGCCACCAATTCTACTGCCAAAGCAACCAAACAAGCCACTCCAGCCTCAACCGGGATGACAGGAGTTGGAATATATGCTGCTCCTACCATTGGACAACCTATAGGAGGACCCTTAGTATCTGCTGTAGGCACCCCAGTGAACCTTCCTTCACCTGCACACATGGCATTCGGTGTCAGGGCTCCAGTTACCGGTGCAGTTGTACCTGGTGCACCGGTAAACGTGGGCCCTGTGACGTACCCTATGCCACATACATCTGCTCCACACAGGTGA 891 0.4781 MTVDEVESSSEWSREQDKAFENALATHPEDASDRWEKIAADVPGKTIEEIKQHYELLVEDVNQIESGCVPLPSYNSSSEGSTSHASDEGAGKKGSGLGNCNSESNHGTKASRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDVLAPQGPITGQTNGAATNSTAKATKQATPASTGMTGVGIYAAPTIGQPIGGPLVSAVGTPVNLPSPAHMAFGVRAPVTGAVVPGAPVNVGPVTYPMPHTSAPHR* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01735 296 ProSiteProfiles Myb-like domain profile. 115 167 IPR001005 -
Lapu2g01735 296 MobiDBLite consensus disorder prediction 1 37 - -
Lapu2g01735 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 171 IPR017930 -
Lapu2g01735 296 MobiDBLite consensus disorder prediction 70 119 - -
Lapu2g01735 296 FunFam transcription factor MYB1R1 121 172 - -
Lapu2g01735 296 CDD SANT 11 58 IPR001005 -
Lapu2g01735 296 SMART sant 8 60 IPR001005 -
Lapu2g01735 296 SMART sant 119 169 IPR001005 -
Lapu2g01735 296 Gene3D - 121 173 - -
Lapu2g01735 296 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Lapu2g01735 296 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Lapu2g01735 296 CDD SANT 122 167 IPR001005 -
Lapu2g01735 296 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Lapu2g01735 296 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Lapu2g01735 296 Pfam Myb-like DNA-binding domain 122 167 IPR001005 -
Lapu2g01735 296 MobiDBLite consensus disorder prediction 8 37 - -
Lapu2g01735 296 PANTHER TRANSCRIPTION FACTOR KUA1 7 291 - -
Lapu2g01735 296 FunFam Transcription factor SRM1 4 71 - -
Lapu2g01735 296 Gene3D - 4 71 - -
Lapu2g01735 296 NCBIfam myb-like DNA-binding domain, SHAQKYF class 119 169 IPR006447 GO:0003677
Lapu2g01735 296 MobiDBLite consensus disorder prediction 70 85 - -
Lapu2g01735 296 ProSiteProfiles SANT domain profile. 123 171 IPR017884 -
Lapu2g01735 296 SUPERFAMILY Homeodomain-like 117 172 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01735 Lapu-Chr2 31069637 31077319 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu2g01735 Myb_DNA-binding 7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01735 - - ccaj:109792793 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01735 2 31069637 31077319 Lapu2g01735 2 31069637 31077319 ECH