Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01718 ATGGTTTTTGGTTGGTGCTGCTCTGTGTGTCTCTTATTTGTCTTGGTGGGTTTGAAAGTAGAAGAAGCTAATGCTCAGTTTTATAGAAAAGTTGGAACTAAACACTTACCTTACTGGTCAATAGTGGTGGATCATTCAGGGCATGGAAACTTCACTACCATACAATCTGCCATTGATTCAGTCCCTTCTCAGAACACGCATTGGGTTTCCATCAAGGTGAAAGCTGGTACCTACAGAGAAAAAGTGAAGATTGCTTATGATAAGCCTTACATCATATTAAAAGGGGAGGGAAAGAGAAGAACTTTTGTTGAGTGGGATGACCATGATAATACCTCACAGAGTCCTACATTTGCAGCCATGGCTGACAATGTTGTTGTCAAATCCATGAGCTTTAGGAATTCATACAACAACCCAATAAACCATAAACCAAACATGCCTGCTGTGGCTGCAATGGTGAGTGGAGACAAGTCTTACTTTTTCAGAGTTGGTTTCTTTGGTTTGCAAGACACTTTATGGGACGACACAGGAAGACATTACTACAAGCTTTGTACCATTCAAGGTGCTGTTGATTTTATCTTTGGTGCAGGCCAATCATTATTTGAGAGGTGTTCCATATCTGTTATTGGTGGAGCTCTAGATCCTGGTTTACCAGGTTTCATCACAGCTCAAGGGAGAACAAATTCAGAAGATGGAAATGGGTTTGTTTTCAAAGAGTGCCATGTGTTTGGAAATGGATCAACTTACTTGGGGAGGCCTTGGAGAAGTCATGCTAGGGTTTTGTTTTACAAGACCAACATCTCCAACATTCTACAACCTGCTGGTTGGGATGCATGGAATTTTCATCCATATCAGAGTGGCATAACGTTCGCAGAGTATGAGAATTTTGGGTCAGGTTCTGATACTTCTCACAGAGTGAGTTGGATGAAGAAGTTGGATTTAGAAACAATTGAGAACATGACAAGCACCAAGTTCATTGACACTGAAGGCTGGCTTCAGAAACAACTATTCTAA 1011 0.4105 MVFGWCCSVCLLFVLVGLKVEEANAQFYRKVGTKHLPYWSIVVDHSGHGNFTTIQSAIDSVPSQNTHWVSIKVKAGTYREKVKIAYDKPYIILKGEGKRRTFVEWDDHDNTSQSPTFAAMADNVVVKSMSFRNSYNNPINHKPNMPAVAAMVSGDKSYFFRVGFFGLQDTLWDDTGRHYYKLCTIQGAVDFIFGAGQSLFERCSISVIGGALDPGLPGFITAQGRTNSEDGNGFVFKECHVFGNGSTYLGRPWRSHARVLFYKTNISNILQPAGWDAWNFHPYQSGITFAEYENFGSGSDTSHRVSWMKKLDLETIENMTSTKFIDTEGWLQKQLF* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01718 336 FunFam Pectinesterase 37 335 - -
Lapu2g01718 336 Pfam Pectinesterase 41 327 IPR000070 GO:0030599|GO:0042545
Lapu2g01718 336 ProSitePatterns Pectinesterase signature 2. 185 194 IPR033131 -
Lapu2g01718 336 Gene3D - 39 336 IPR012334 -
Lapu2g01718 336 SUPERFAMILY Pectin lyase-like 40 333 IPR011050 -
Lapu2g01718 336 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 39 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01718 Lapu-Chr2 30915024 30919687 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01718 40 278 Carbohydrate Esterase AT2G19150 45.833 2.17e-74 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01718 - - gmx:100819252 555.829