Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01717 ATGGAGACTTCTCCAGTATACAATCTGCCATTGATTCAGTCCCTTCCAACAACAATATCTGGATTTGCATCAAAGGAGAAGTTGACTATCCCTGTAGACAAGCCTCATATAGTCCTAGAAGGAGTGTCAAAAAAGAATACTGTGGTTGAGTGGGATGACCATGATTCAAGTGCACAGAGTCCTACATTCTTAACCATGGCTAATAATATTGTGGTCAGGGCCATGAGCTTCAGGAATACTTTCAATGATCCAAACAGTGGTCACCCCATGACACCTGCAGTGGCTGCAATGATATGTGGAGACAAATCATCCTTCCAAAACGTTGGCTTCTATAGTTTGCAAGACACTTTGTGGGATGCCAAAGGAAGACACTACTTCAATTCTTGCACCATTGAAGGTGCCATGGATTTCATCTTTGGTACTGGTCAATCTATATATGAGACTTGTAGCATATCAGTTCGTGAGGCGATTCCAGGTGCAGCTATTATTGGTTTCATCACAGCACAGGGAAGAACAAATCCAAACGATGCAAATGGTTTTGTTTTTAAGAATTGCAACATCCATGGAGTTGGTAAAACTTACTTGGGAAGACCATGGAGAGCTTATGCCAGAGTTCTTTTCTACAAAAGTGAAATGTCTTCCATCGTACAACCACTAGGTTGGCAGCCATGGAATTCCAATGCCAATTTAAATGGAGTTGTATTTGCAGAGTATGGTAATTTTGGTCCTGGTTCCGACTTGTCTGGGAGAGTAAGTTGGATGAAGAACTTGGAGTTATCAACCATAATGGAAATGACAAGTATTCGGTTTGTGGACACTGATGGTTGGCTCAAGATTCATCAAAACTTACATTAA 855 0.4117 METSPVYNLPLIQSLPTTISGFASKEKLTIPVDKPHIVLEGVSKKNTVVEWDDHDSSAQSPTFLTMANNIVVRAMSFRNTFNDPNSGHPMTPAVAAMICGDKSSFQNVGFYSLQDTLWDAKGRHYFNSCTIEGAMDFIFGTGQSIYETCSISVREAIPGAAIIGFITAQGRTNPNDANGFVFKNCNIHGVGKTYLGRPWRAYARVLFYKSEMSSIVQPLGWQPWNSNANLNGVVFAEYGNFGPGSDLSGRVSWMKNLELSTIMEMTSIRFVDTDGWLKIHQNLH* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01717 284 Gene3D - 6 283 IPR012334 -
Lapu2g01717 284 Pfam Pectinesterase 25 272 IPR000070 GO:0030599|GO:0042545
Lapu2g01717 284 SUPERFAMILY Pectin lyase-like 25 279 IPR011050 -
Lapu2g01717 284 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01717 Lapu-Chr2 30907204 30909568 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01717 1 229 Carbohydrate Esterase AT2G19150 41.304 3.83e-63 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01717 - - aprc:113870328 356.681