Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01701 ATGGCTCCGTCGCGTTCCGGCGGCGACGCATGCAAGGGCGCAGCCGCGGAGTTCCCGGCAGGGCTCCGGGTTTTGGTCGTCGACGATGACGCCACCACGCTCAGGATTATAGAGCAAATGTCTATTCGATGCCGTTACCGTGTTACCACATGCACTGAGGCTACTGTGGCTTTGAATATTCTGCGGGAAAGGAAAGGTTGTTTTGATGTGGTACTGAGTGATGTTCATATGCCAGACATGGATGGCTATAAGCTCCTTGAACATGTTGGGCTGGAAATGGACCTTCCTGTAATTATGATGTCTGGTGATAGTACAACAAGTGCTGTCATGAAGGGAATTAGACATGGGGCTTGTGATTATTTGATTAAGCCTGTACGTGAGGAAGAGCTGAGGAATATATGGCAGCATGTCGTTAGGAAAATCTGGAATGAAAATAAAGAACACGATAATTCTGGCAGCATGGAAGATAGTGATTGGAATAAACGGGGGAATGATGATACTGAATATACTTCTTCTGTTGCTGATGCAGCAGAAGTAGTTAAAGCACCAAAAAAAAGGAGCAGTTTAAAAGAAGAAGATATTGAAGTGGAGAGTGATGATCCAACTACATCTAAGAAGCCTCGTGTTGTGTGGTCAGTAGAACTGCATCAACAATTTGTCAGTGCTGTGAATCAACTTGGGCTTGACAAGGCTGTGCCAAAGAGAATACTTGAATTGATGAATGTCCCTGGTTTGACTAGAGAGAATGTTGCAAGTCATTTGCAGAAATTTAGACTTTATTTGAAGCGATTAAGTGGAGTGGCACAGCAACAGAATGGGATGCTAAATGCAGTTCCTGGGACTTTAGAATCCAAACTGAGTGCTACTGGAAGATTTGACATACATGCTTTGGCTGCTGCTGGCCATGTTCCACCTGAGACACTTGCAGCCCTTCATGCTGAACTCTTAGGTCGCCCTGCAACTAACATAATGTCTACAGTGGACCAGGCTACCTTGCTGCAAGCATCCATACAGGGGATAAAACATTCCCATGCTGAACATTCTGTGGCGTATGGTCAGCCTCTTGTAAAGTGTCCTTCCAACATTGGCAAGGATTTGCCTCCATCTATCTTAACTGCAAATGATGTGTCATCAGGATATGGTGCATGGCCTTCACCTAATAATACAATGGGTTCAGTGAGACCGAATAATAGTGTTGAAAGAGTGGGTACTCAGAATAACAATATGCTGATGGATATATTAGAGCACCAGCAAAGGCAGCAGCCCCAGCAAAAACAACAGCACCACCACCAGCAACAAAAACAACAGCAACAACTGCAGCAACAACCTCTGCTACATGATCAAAGTTGTTCCATCAATGTTCAACCATCTTGCTTGATGGTTCCGTCTCAATCCTCCAACACTTTACAGGCAGTAAATAGTTCAGCTTCTGCCAATCAGAATTGCAGTTTTGGCAGGAATGCCATTATTGATTATAGTTTATTGTCACAGAAATCAAATAATTCAGTTAGTGCTTCTCAATTTCCCGGTGGGGACACAAAAGCTCAAGGTGTTCTCTATGGGTATACTACACCCTCCACTTGTTCTATGAGCTCCATCAATGGCAATATTCAGCAGCTTCAAAACTCAACTTTGACATTTGGTGCTGCAAGACCTTTGCCGAGCCCTTTGCCCATGTCTGATAGACAAGATCCCTACGGTTTCAAATTGTGTGATTCATTCGATCAAGTATGCCTTAGGAATATTGGGTTTCTTGGCAAAGGTACCTGCATTCCAAATAGGTTTGTGCAAAATGAAATTGAATCATCTGTAAGTGGTTTTAGTCAAATGAAAGTCAATGTAGATGGCAGTGGCAACACAATGAAGGAGGAGCCAAATTTTATAAATATGCAAAAAGTGAGTCGCCCTATCATAGAAAGATATCAATCTTGTGATCATTCAAGTGTGTTTACTGAATAG 1959 0.4319 MAPSRSGGDACKGAAAEFPAGLRVLVVDDDATTLRIIEQMSIRCRYRVTTCTEATVALNILRERKGCFDVVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQHVVRKIWNENKEHDNSGSMEDSDWNKRGNDDTEYTSSVADAAEVVKAPKKRSSLKEEDIEVESDDPTTSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRLSGVAQQQNGMLNAVPGTLESKLSATGRFDIHALAAAGHVPPETLAALHAELLGRPATNIMSTVDQATLLQASIQGIKHSHAEHSVAYGQPLVKCPSNIGKDLPPSILTANDVSSGYGAWPSPNNTMGSVRPNNSVERVGTQNNNMLMDILEHQQRQQPQQKQQHHHQQQKQQQQLQQQPLLHDQSCSINVQPSCLMVPSQSSNTLQAVNSSASANQNCSFGRNAIIDYSLLSQKSNNSVSASQFPGGDTKAQGVLYGYTTPSTCSMSSINGNIQQLQNSTLTFGAARPLPSPLPMSDRQDPYGFKLCDSFDQVCLRNIGFLGKGTCIPNRFVQNEIESSVSGFSQMKVNVDGSGNTMKEEPNFINMQKVSRPIIERYQSCDHSSVFTE* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01701 652 NCBIfam myb-like DNA-binding domain, SHAQKYF class 206 259 IPR006447 GO:0003677
Lapu2g01701 652 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 262 IPR017930 -
Lapu2g01701 652 Pfam Response regulator receiver domain 24 133 IPR001789 GO:0000160
Lapu2g01701 652 CDD REC_typeB_ARR-like 24 138 - -
Lapu2g01701 652 MobiDBLite consensus disorder prediction 417 442 - -
Lapu2g01701 652 MobiDBLite consensus disorder prediction 179 204 - -
Lapu2g01701 652 FunFam Two-component response regulator 202 265 - -
Lapu2g01701 652 MobiDBLite consensus disorder prediction 147 204 - -
Lapu2g01701 652 SUPERFAMILY Homeodomain-like 203 263 IPR009057 -
Lapu2g01701 652 ProSiteProfiles Response regulatory domain profile. 23 138 IPR001789 GO:0000160
Lapu2g01701 652 SUPERFAMILY CheY-like 21 145 IPR011006 -
Lapu2g01701 652 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 428 IPR045279 GO:0009736
Lapu2g01701 652 MobiDBLite consensus disorder prediction 147 165 - -
Lapu2g01701 652 Gene3D - 22 156 - -
Lapu2g01701 652 Gene3D - 202 265 - -
Lapu2g01701 652 SMART REC_2 22 134 IPR001789 GO:0000160
Lapu2g01701 652 FunFam Two-component response regulator 22 159 - -
Lapu2g01701 652 Pfam Myb-like DNA-binding domain 208 256 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01701 Lapu-Chr2 30750663 30756606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01701 56 320 Response Regulator Gene Family AT3G16857 53.846 3.34e-90 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Lapu2g01701 Response_reg 2.1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01701 - K14491 gmx:100817125 1071.61