Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01679 ATGGAGAGGGATTTCCTGGGTCTCACCTCAAAGGAACCATTCGTTGTAGTTAAGGAAGAGATGAATAATGGTAGTGGGTGCAAAGACTCAGGTTTCACAAACGGAGGGATGGTAAAATGGCCCTTCATGAACAAAGTATCTGTCCATCCTCATTTGATGTCTTTGAATACTCCTCAGAAATCTGTGAACCATGATGGACAAGGTGGCATTCATTTTTCCATGACACCGTATCCTGCACTGCATGATGCGAATTATATGAATCGCCCTCATGATGTGAAGATGTTTTCAGTTCCCAATCAAGCAAATTCAGTTTCCATGGGACATCCATTCCTGAAGAATCATTTTGCAACTGTTGGTCAGGGTATGAATGGTTCTAGTATGAAGCAACCACTACTGGGGAGAATACCTGTTACAGCACCACATTCAGTTCTTCCTATAGTTGGTGTTGATGCTGTTGCTAGAATGGCCGAAACATGTGTGAAACCATCTATATCTGTTCCTAAACTTACAATCTTCTATGCTGGCACTGTGAATGTCTTTGATGATATCACTCCTGAGAAGGCACAAGCTATCATGTTGATAGCTGGGAATGGCTTATCAGCTGCTTCTAATGAGGCAGTGCCTAATGTTCAGGCACCCAGATTGGCATTGGCAGTAGGTGATGGTGTGCCTGTCAGTAAGCCCATACCACCCTGCTCTAATCTTTCAAGTCCATTATCTGTTTCTTCACATACTGGTGCACAGACAGGGAGTGGTTCAAGTAGCAGTGATGAATTTCTGGCAGCTAAAACATCTCGTGGTATACCTGCTTCTGTTAACAAAACTGAGAATCCTAAAGTAGTCAGCACAACCACCATGCTACCGTCAGCTGTGCCACAGGCTCGCAAGGCATCATTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTGTTTAGTGCAGCACCATATAACCTTACCAAAAAGTCTGAGAATAGGCCAGAGCAGAGTACTATTGTTTCTGACATCAGTGCAAGTGAGGGTGCTGATGCACTATCAACCAAGCAAGGATAG 1050 0.4419 MERDFLGLTSKEPFVVVKEEMNNGSGCKDSGFTNGGMVKWPFMNKVSVHPHLMSLNTPQKSVNHDGQGGIHFSMTPYPALHDANYMNRPHDVKMFSVPNQANSVSMGHPFLKNHFATVGQGMNGSSMKQPLLGRIPVTAPHSVLPIVGVDAVARMAETCVKPSISVPKLTIFYAGTVNVFDDITPEKAQAIMLIAGNGLSAASNEAVPNVQAPRLALAVGDGVPVSKPIPPCSNLSSPLSVSSHTGAQTGSGSSSSDEFLAAKTSRGIPASVNKTENPKVVSTTTMLPSAVPQARKASLARFLEKRKERVFSAAPYNLTKKSENRPEQSTIVSDISASEGADALSTKQG* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01679 349 MobiDBLite consensus disorder prediction 234 260 - -
Lapu2g01679 349 MobiDBLite consensus disorder prediction 319 349 - -
Lapu2g01679 349 Pfam Jas motif 292 316 IPR018467 -
Lapu2g01679 349 SMART tify_2 162 197 IPR010399 -
Lapu2g01679 349 Pfam tify domain 168 196 IPR010399 -
Lapu2g01679 349 ProSiteProfiles Tify domain profile. 162 197 IPR010399 -
Lapu2g01679 349 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 109 325 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01679 Lapu-Chr2 30525526 30529889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01679 38 322 Tify Gene Family AT3G17860 37.539 1.86e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lapu2g01679 tify 1.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01679 K13464 - gmx:100799314 426.017