Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01673 ATGGCGGACACTGGCGGCGACGACAATGGCGTTATTTATCTTCACGGCGACCTCGATTTGAAAATCATCGAGGCGCGGCACTTGCCGAACATGGACATCTTTTCGGAGCGTCTCCGCCGTTGCGTAACCGGCTGCGACACTATCAAATTCCACTCCGACGACGTTGCCGACGGCGGAAGCCAGCGGACGCGGCAGCACCGCCACCGCAGGATCATCACGAGCGACCCGTACGTGACGGTTTCGGTGCCGCAGGCCACGGTGGCGCGCACGCGCGTGCTGAAGAATTCGCCGAATCCTTCATGGAACGAGCGGTTCCACATCCCGCTCGCGCATCCGGTCGTGGATTTGGAGTTCCGTGTGAAGGACGACGACGCTTTCGGCTCGCAGTTGATGGGGACCGTGAAGATTCCGGCGCGGCGGATTGCCACCGGCCAGTTGATTTCCGACTGGTTCCCTATCCTCGGACCGTCTGGGAAACCGGCGAAGCCGGACACGGCGCTGCACGTGGAGATGAAATTCACAGCGGTTGAGGATAATTTGCTTTACCAGCGAGGCATTGCGGCGGATCAGGAGCACCGGGGAGTGAGGCACACGTATTTTCCGGTGAGAAAGGGCAGTTCGGTGAGGTTGTATCAGGATGCGCACTGTCCCGAATCTGGCGGAGGGAAGTTACCGGAGGTTAAGCTAGAGAATGGAGAGGTTTATAGGCACGGGAAGTGTTGGGAGGATATTTGTTATGCCATATCTGAGGCTCATCACATGGTGTATTTGGTGGGTTGGTCGATTTACCATAAGGTGAAGATTGTTAGAGAGCCTACTAGGCCGTTGCCACGTGGTGGCGATTTGACGCTCGGCGAATTGCTGAAGTATAAGTCTGAAGAAGGAGTGAGAGTGCTGTTGCTGGTTTGGGATGATAAAACTTCGCACGATAAGGTTTTCCTAAAGACGAATGGTGTGATGCAGACTCATGATGAGGAAACCAAGAAGTTTTTTAAACATTCTTCAGTAATGTGTGTTCTGTCGCCTCGGTATGCCAGCAGCAAGATGAGCTTCTTGAAGCAACAGGTTGTTGGAACGGTCTTCACACACCACCAAAAGTGTGTGATTGTGGACACACAGGCTACTGGGAATAATCGGAAGATAACTGCATTTCTTGGAGGTCTTGACCTATGTGACGGTCGCTATGACACGCCCGAGCATCGTCTGTTTCGTGATCTTGACACTGTATTTTCTGGTGATTTCCACAATCCTACATTTCCTGCTGGAACAAGGAGTCCTAGACAACCATGGCATGATTTGCACTGCAGAATAGATGGACCTGCTGCATATGATGTTCTTATTAATTTTGAACAGCGATGGAAAAAGGCAACTAAGTGGAAAGAGTTTGCAATCCTTTTCAAAAAATCCTCTCAGTGGCATGATGATGCTTTAATAAGAATAGAACGCATCTCATGGATTTTAAGTCCTTCCGTTACCACCTCAAAGGATAATAATTATACAGTTGTTCCAGAGGATGACCCTTTAGTATGGGTTTCTAGTGAAGATGATCCTGAAAACTGGCATGTTCAGATATTCCGCTCCATTGACTCAGGGTCCCTGAAAGGATTTCCCAAACATGTTGATGTTGCTCTGTCCCAGAATCTTATTTGTGCTAAAAATTTGGTCATAGACAAAAGCATTCAAACAGCGTACATTCAAGCGATCAGATCTGCTCAACACTTTATTTATATTGAAAACCAATACTTCATTGGATCATCATATGCATGGCCATCTTATAAAGATGCAGGGGCTGATAATCTCATCCCAATGGAGTTGGCACTGAAAATTACTAGTAAAATCAGAGCTAAGGAGAGATTTGCTGTCTACGTTGTTTTGCCAATGTGGCCAGAAGGTGATCCTAAAACTGGGGCTATGCAAGAAATCCTATTTTGGCAGGGCCAAACGATGCAAGCAATGTATGATGCTGTTGCTAGAGAATTAAAAACAATGCAACTTACTGATGTGCACCCACAAGATTACCTCAATTTTTATTGCCTTGGTAATCGGGAAGACTTCAGTGAAGAAAGTTCAAGCACAAATGGAGCACAGGTCTCGGGAGCATATAAACATCGTCGATTTATGATTTATGTGCATGCTAAGGGGATGATTGTTGATGATGAGTATGTTATAATTGGATCTGCTAATATAAACCAAAGATCTATGGCTGGTACTAAAGATACTGAGATAGCTATGGGTGCATATCAACCCCATTACACATGGTCAGCAAAGCAAAGACATCCATATGGTCAGATTTATGGTTACAGAATGTCACTTTGGGGAGAGCATCTTGACATGTTAGATGAAACTTTTGAGGAACCAGAGAGTTTGGAGTGTGTGCGTAAAGTGAATGCAATTGCTGAAAATAATTGGAAATTATTCGCTTCTGAAGATTTCTCACGTCTGCAAGGACATCTTCTTAAGTATCCTGTACAGGTAGATTCTGATGGAAAGATTAGATCCCTACCCGATTGTGAGAGTTTTCCCGATGCTGGCGGTAAGATATTGGGTGCTCACTCCACAACAATCCCAGATATTCTAACAACATAA 2586 0.464 MADTGGDDNGVIYLHGDLDLKIIEARHLPNMDIFSERLRRCVTGCDTIKFHSDDVADGGSQRTRQHRHRRIITSDPYVTVSVPQATVARTRVLKNSPNPSWNERFHIPLAHPVVDLEFRVKDDDAFGSQLMGTVKIPARRIATGQLISDWFPILGPSGKPAKPDTALHVEMKFTAVEDNLLYQRGIAADQEHRGVRHTYFPVRKGSSVRLYQDAHCPESGGGKLPEVKLENGEVYRHGKCWEDICYAISEAHHMVYLVGWSIYHKVKIVREPTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKVFLKTNGVMQTHDEETKKFFKHSSVMCVLSPRYASSKMSFLKQQVVGTVFTHHQKCVIVDTQATGNNRKITAFLGGLDLCDGRYDTPEHRLFRDLDTVFSGDFHNPTFPAGTRSPRQPWHDLHCRIDGPAAYDVLINFEQRWKKATKWKEFAILFKKSSQWHDDALIRIERISWILSPSVTTSKDNNYTVVPEDDPLVWVSSEDDPENWHVQIFRSIDSGSLKGFPKHVDVALSQNLICAKNLVIDKSIQTAYIQAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKITSKIRAKERFAVYVVLPMWPEGDPKTGAMQEILFWQGQTMQAMYDAVARELKTMQLTDVHPQDYLNFYCLGNREDFSEESSSTNGAQVSGAYKHRRFMIYVHAKGMIVDDEYVIIGSANINQRSMAGTKDTEIAMGAYQPHYTWSAKQRHPYGQIYGYRMSLWGEHLDMLDETFEEPESLECVRKVNAIAENNWKLFASEDFSRLQGHLLKYPVQVDSDGKIRSLPDCESFPDAGGKILGAHSTTIPDILTT* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01673 861 FunFam Phospholipase D delta 231 475 - -
Lapu2g01673 861 CDD C2_plant_PLD 10 174 - -
Lapu2g01673 861 PIRSF PLD_plant 5 861 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lapu2g01673 861 SMART pld_4 706 733 IPR001736 GO:0003824
Lapu2g01673 861 SMART pld_4 359 394 IPR001736 GO:0003824
Lapu2g01673 861 Pfam Phospholipase D Active site motif 359 394 IPR001736 GO:0003824
Lapu2g01673 861 Pfam Phospholipase D Active site motif 707 733 IPR001736 GO:0003824
Lapu2g01673 861 Gene3D Endonuclease Chain A 528 757 - -
Lapu2g01673 861 ProSiteProfiles C2 domain profile. 1 151 IPR000008 -
Lapu2g01673 861 Pfam C2 domain 16 153 IPR000008 -
Lapu2g01673 861 SUPERFAMILY Phospholipase D/nuclease 199 467 - -
Lapu2g01673 861 PANTHER PHOSPHOLIPASE D 10 851 IPR015679 -
Lapu2g01673 861 Gene3D C2 domain 15 183 IPR035892 -
Lapu2g01673 861 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 359 394 IPR001736 GO:0003824
Lapu2g01673 861 SMART C2_3c 17 150 IPR000008 -
Lapu2g01673 861 SUPERFAMILY Phospholipase D/nuclease 557 787 - -
Lapu2g01673 861 Pfam Phospholipase D C terminal 780 850 IPR024632 -
Lapu2g01673 861 Gene3D Endonuclease Chain A 228 479 - -
Lapu2g01673 861 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 174 IPR035892 -
Lapu2g01673 861 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 706 733 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01673 Lapu-Chr2 30460200 30468660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01673 1 697 Phospholipase D Gene Family (Wang group) AT4G35790 70.655 0.0 1035
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01673 K01115 - gmx:100801787 1608.19