Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01656 ATGGCATTCACTCCTAATCACGCGAAAGAGTTCATGAGCGACGGCGAGGGATCGCCGAGGGCGATTCTGGAAACCCCTGTTTCGGAGACAGAGTCCGAGACAGAGTCGCCGGCGGATAGCGGGAAAGAGATCCTCCGGGAAGGTTACCTGCCGCCATGGAAGACTATGGTCGACGTTTTCAAGTTCAAGTCTGTGCGAAAGCTAACATCCATTCCTTTGCTTGCGGCGAGCCATGATATCTCTCGGAAGGGTTTGACCAAAAAACTGGCTCGTATTCGAAGTGCCGAAGATAGTATTGATATTGGAGCTATTCCTGCGAAACCCTCCTGGAGGAACTTTGATTATGAAGAGTTAGCAGCTGCCACTAATGATTTCAGTTCTGATAACTTGGTCGGTAAAGGTGGTCATGCTGAAGTGTACAAAGGCTGCTTACCTGATGGTCAAGTTATAGCAGTAAAGAGGCTAATGAAGAATGAAAAGGATGCTGCAGATAGAGCTGGTGATTTTTTGACAGAGCTTGGGATTATTGCACACATAAACCACTCAAATGCAACACACCTTGTTGGCTTTGGGGTTGATCGCGGCCTCTACTTTGTCCTACAATTAGCTCCACATGGAAGTCTCAGTTCTATGCTTTTTGGTTCTGAAGGCATGGACTGGAAAAAACGATTCAAGGTAGCTATTGGAGTGGCTGAGGGATTGAATTATCTCCACAAAGAGTGCCCAAAACGAATCATTCATAGGGACATCAAGGCCTCCAACATATTACTAAACGAAAATTATGAAGCTGAGATATCAGATTTTGGACTGGCAAAGTGGCTTCCGAACAAGTGGGCCAATCATGTTGTCTTCCCAATAGAAGGGACATTTGGGTTAGTGTTGTATTTGGCTCCGGAGTACTTTATGCATGGAATTGTTGACGAGAGAACTGATGTATTTGCGTTTGGAGTCTTGCTGTTGGAGCTCATTACAGGCCGTCAGGCCGTTGATTCAGATAGTAGGCAAAGTCTTGTCACCTGGGCCAAGCCGATGCTGAACACAAACAATGTAAAGGGCATAGCAGACCCCAGATTAGGAGAAGAATATGATCACACTGAAATGATGCGCGTCATGGTGACAGCTTCCATGTGTGTCCACCATGCGTCCTCCAAGCGGCCATTCATGAATAAGGTTGTGCAGCTGCTAAAGGGTGAAGAGACAATTATAGACCTTAAGCAAAATTCACTTGCATCAAAATCTCAGTTACTAGAGGCATGTGACCTAGAAGATTATACTTGCTCAAGTTACCTGAAGGACATGAGTCGCCACATGCAACTGATCATGGAGTGA 1329 0.459 MAFTPNHAKEFMSDGEGSPRAILETPVSETESETESPADSGKEILREGYLPPWKTMVDVFKFKSVRKLTSIPLLAASHDISRKGLTKKLARIRSAEDSIDIGAIPAKPSWRNFDYEELAAATNDFSSDNLVGKGGHAEVYKGCLPDGQVIAVKRLMKNEKDAADRAGDFLTELGIIAHINHSNATHLVGFGVDRGLYFVLQLAPHGSLSSMLFGSEGMDWKKRFKVAIGVAEGLNYLHKECPKRIIHRDIKASNILLNENYEAEISDFGLAKWLPNKWANHVVFPIEGTFGLVLYLAPEYFMHGIVDERTDVFAFGVLLLELITGRQAVDSDSRQSLVTWAKPMLNTNNVKGIADPRLGEEYDHTEMMRVMVTASMCVHHASSKRPFMNKVVQLLKGEETIIDLKQNSLASKSQLLEACDLEDYTCSSYLKDMSRHMQLIME* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01656 442 Pfam Protein tyrosine and serine/threonine kinase 129 395 IPR001245 GO:0004672|GO:0006468
Lapu2g01656 442 SUPERFAMILY Protein kinase-like (PK-like) 107 395 IPR011009 -
Lapu2g01656 442 MobiDBLite consensus disorder prediction 1 43 - -
Lapu2g01656 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Lapu2g01656 442 SMART serkin_6 125 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01656 442 ProSiteProfiles Protein kinase domain profile. 125 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01656 442 Gene3D Transferase(Phosphotransferase) domain 1 204 415 - -
Lapu2g01656 442 ProSitePatterns Protein kinases ATP-binding region signature. 131 153 IPR017441 GO:0005524
Lapu2g01656 442 Gene3D Phosphorylase Kinase; domain 1 87 199 - -
Lapu2g01656 442 PANTHER OS08G0249100 PROTEIN 18 420 IPR046958 -
Lapu2g01656 442 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 204 409 - -
Lapu2g01656 442 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 100 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01656 Lapu-Chr2 30335548 30340376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01656 113 391 Trihelix Transcription Factor Family AT1G68690 45.329 6.45e-70 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lapu2g01656 PK_Tyr_Ser-Thr 5.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01656 - - gmx:100818314 713.375