Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01654 ATGGATGCAATCCAAACAGAGAAAGTCTATGTTGCTGTTGGTAATGATGCACAGGATGGATTTAAGACTTTAAATTGGGCTCTCAAGAAATGGAATTTCCATCCAATTTCCATTGTTATTCTGCATGTCACGCACAATACTCCCATGGATTATGTCTATACACCATTTGGGAAACTTCCAGCGAGATCTGTGAGTGAGGAGAAACTACAAATTCTCAGGAAAGATGAACAAGAGAAAATCAACAAGCTGCTTTCCAAGTATGTTGCTTTCTGTGGCAAGGTGCCAGCAGAGATTCTTGAAGTTGAGAAATCGGATGAGCCAATGCAAAAGCTAGTCATAGACTTGATCTTTGGTCTAGGAATAACCAAATTGATCATGGGATTTTCATTCATGAAGCCCTCCATGAAATCTAAAGGTGCTATTAGTGGATTGTTCTATGTTCATCAGCACAAGCCTTCCTTCTGTGAATTGTTCATTATTTGTGGGGGTAAGCAAATTTTTCTCAGAGGAAAAAATGATGAGAAAATCATGGAGGATGATAATGGAGTCACGGTTGCAAGAATAAGAGATAAGATAACCTTCAAAGATTGGTTAGATAAATGGTTCAATGACAAAACTAACTATTCTCCAGATAAAAGTGCATCACTTTCCTCAAGCAATTTGGAGTCCCCTGTGAACAGAAACCAATGGGAATTTTACCTGCAGGAAATTGAAAATTATTATCAAGAATTGTTGTCTTCCAAGTTGGAGGAAGGAAACTGCGGGCTAGATAATGACGACTCACAGATTGGTCCAAGTGAGCCACATGTCACTGAACACAACAATTATAATATGAGTGGTGCAGAGAAAATTGAGATGCTAAAAAATAAGTTGAATGAAGCTCAGAAGACCATTGTATTGAAGAGGAAAGAGGCCAAAGATAGTAAAGAGAGACACGCAAAAGCTGAATGGGCAATTTGTCTGTGCAACAGTCGGGCTGAAGAAGTAGAAGGTCGAATTCGAGAAGAGGTGAGTACAAAGGATGAGCTAAAGAAGGAATGGGAAGCGGAGAGAGAGCAGACGGAGGAGATGAGAACGGAAGTGGAAGAGAGGAGGAGGAGGCTCAGTTCCCTCACGGAGGTGCAATCGGAGCTCTCCAACAGGCTTCAAATATGGACGGCGGCCAAGGCAAGGGCGGAGACGCAGCTCGAGAGGACGGTGGCGGAGAGGAGGGAGATGATGAGGGAGATCGAAGAGCTCAGGCGCCAGAGAGACGTGCTCAACCGAAGGATCGAGTTCTGCAAGCAGAAGGACGCCATTGGAATGGCCGCCAGGCTCGCCGACACGTGCTGCACCTTCCGCGAGTACACGGCGGAGGAAATCCGGTTGGCCACCGACAACTTCTCAGAGCGGCTGAGGTTGAAGTCGGGTGGAGATTGGAGCAATGTGTACCGAGGACGCTTCAACCACTCCACAGTTGCCATCAAGATGCTCCCTTCTTTCTCCCTTCAACATTTCCAATCCAAGGTGAGGCTTCTTGGTGATATTAGGCATCCTCATCTGATTGCCATGGTGGGGTTTTGCTCAGAGCCCAAATGCATGGTTTTGGAATACATGCGCAACGGAAGCTTGAGAGACATGCTGTTTTCTAGGAGAAAAAACCGCGCCTTAAGATGGCACGACCGAATACGAATAGGCACAGAAGTTTGTTCGGGCCTGGGTTTTCTCAATGCAGTTGAGCCCAGGCCTATTATTCATTGCCATTTGACCCCATCTAATGTCCTCCTAGACCGCAATTTGGTTGCAAAGATCACGGGCTTTGGGCTCCATGATTGCCGTGACGAACAGTGTGATGTTGAGTCAGATTTGCAGGCAATAGGGGTTTTGTTAATGCATCTTTTGACAGGAAGAAATTGGGCCGGGCTCGTTGAGGAGGTGATGACAGTGGATACAGATAGGGAGGCTTTGGCTAGTGTTCTTGATGAGATGGCTGGGCAATGGCCATTGGATCTAGCAAAAGAACTTGCAGGCCTGGCTTTGAGGTGCATGTCAACCAAAAGCAAGCCCAACTCAGAACTGAGCATTGCAAAGGTGTTGGAGGAACTGAATGAGATAAGAAGAAAGGGGGATGAAATAGTTGGAAGGGAAGGACGAAAGGCAATCATTGGTGGATGTATAGATAGAGAGGGATCCAGTGATGTGCCTAGTGTTTTTCTTTGCCCCATACTTCAGGAGGTAATGAAAAACCCACACCTGGCAGCAGATGGGTTTTCTTATGAGCTTGAAGCAATAGACCACTGGCTGCAATCGGGGCGTGACACATCACCAATGACAAATTTGAGGCTGAAACACACATTCCTCACCCCGAATCACACTCTCCGTTCCCTGATTGAGGATTGGCAGACCAACAAATCAACTAAACTTACACACTAA 2412 0.4581 MDAIQTEKVYVAVGNDAQDGFKTLNWALKKWNFHPISIVILHVTHNTPMDYVYTPFGKLPARSVSEEKLQILRKDEQEKINKLLSKYVAFCGKVPAEILEVEKSDEPMQKLVIDLIFGLGITKLIMGFSFMKPSMKSKGAISGLFYVHQHKPSFCELFIICGGKQIFLRGKNDEKIMEDDNGVTVARIRDKITFKDWLDKWFNDKTNYSPDKSASLSSSNLESPVNRNQWEFYLQEIENYYQELLSSKLEEGNCGLDNDDSQIGPSEPHVTEHNNYNMSGAEKIEMLKNKLNEAQKTIVLKRKEAKDSKERHAKAEWAICLCNSRAEEVEGRIREEVSTKDELKKEWEAEREQTEEMRTEVEERRRRLSSLTEVQSELSNRLQIWTAAKARAETQLERTVAERREMMREIEELRRQRDVLNRRIEFCKQKDAIGMAARLADTCCTFREYTAEEIRLATDNFSERLRLKSGGDWSNVYRGRFNHSTVAIKMLPSFSLQHFQSKVRLLGDIRHPHLIAMVGFCSEPKCMVLEYMRNGSLRDMLFSRRKNRALRWHDRIRIGTEVCSGLGFLNAVEPRPIIHCHLTPSNVLLDRNLVAKITGFGLHDCRDEQCDVESDLQAIGVLLMHLLTGRNWAGLVEEVMTVDTDREALASVLDEMAGQWPLDLAKELAGLALRCMSTKSKPNSELSIAKVLEELNEIRRKGDEIVGREGRKAIIGGCIDREGSSDVPSVFLCPILQEVMKNPHLAADGFSYELEAIDHWLQSGRDTSPMTNLRLKHTFLTPNHTLRSLIEDWQTNKSTKLTH* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01654 803 Coils Coil 277 311 - -
Lapu2g01654 803 Gene3D Transferase(Phosphotransferase) domain 1 446 607 - -
Lapu2g01654 803 Gene3D Transferase(Phosphotransferase) domain 1 608 711 - -
Lapu2g01654 803 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 725 802 IPR013083 -
Lapu2g01654 803 ProSiteProfiles U-box domain profile. 726 800 IPR003613 GO:0004842|GO:0016567
Lapu2g01654 803 Pfam U-box domain 727 798 IPR003613 GO:0004842|GO:0016567
Lapu2g01654 803 Gene3D - 274 445 - -
Lapu2g01654 803 SUPERFAMILY Protein kinase-like (PK-like) 446 677 IPR011009 -
Lapu2g01654 803 PANTHER OS02G0152300 PROTEIN 9 791 - -
Lapu2g01654 803 Coils Coil 66 86 - -
Lapu2g01654 803 SMART Ubox_2 730 793 IPR003613 GO:0004842|GO:0016567
Lapu2g01654 803 SUPERFAMILY RING/U-box 724 798 - -
Lapu2g01654 803 ProSiteProfiles Protein kinase domain profile. 462 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01654 803 Coils Coil 389 430 - -
Lapu2g01654 803 Pfam Protein tyrosine and serine/threonine kinase 471 606 IPR001245 GO:0004672|GO:0006468
Lapu2g01654 803 Coils Coil 326 371 - -
Lapu2g01654 803 CDD RING-Ubox_WDSUB1-like 728 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01654 Lapu-Chr2 30303793 30308164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01654 7 802 U-box Gene Family AT5G65500 50.309 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lapu2g01654 PK_Tyr_Ser-Thr 1.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01654 - - gmx:100786771 1365.9