Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01652 ATGAAGTATTTTTCTCTCACACTACTTACATTTTGGTCTATACTCATTCATCTTTTCTCTCTCTTTATATTCAAATCATTATGGTTTACTCCAAACATCACTGCCTTTGCATCAGGAAATGAAACTGATCATTTTGCATTGCTCAAGTTCAAGGAATCCATATCCACTGATCCAAACAAAATCTTGTTTTCTTGGAATACTTCTTCACACTTCTGTAACTGGCATGGAATCACGTGCGATTCTATGCTTCAAAGAGTTACAAAGTTGAATTTGGAAGGATACAAGTTGAAGGGGTTCATATCTCCACACATTGGCAATCTATCTCATATGACCACTTTCACCATTGGAAGAAACAACTTCTATGGAGAACTCCCCCAAGAATTAGGTCAGTTGTCAAAACTCCAGTACCTTTCTGTTGCAAATAACTCGTTCTTGGTAGGAAAAATCCCTTCAAACTTAACTGCTTGTACTAACCTCAAAATCTTGCACCTAGGTGGGAACAATTTCACTGGTAAGATACCAGTCGAAATTGGCTCACATCAGAAGCTTCAACAATTGTTCCTTTACAAAAACAATTTATCTGGAATAATCCCATCATTCATTGGGAATCTTTCATCCTTAAGTCGTCTCTCCCTAGGTTATAACAACTTTGAGGGAGACATTCCACAAGAAATTTGTCATCTCAAAAGTTTGATAGTTCTATCATTACCTGTCAACAAATTGACAGGAACATTTCCTTCTTGTTTTTATAATATGTCATCTCTTACTCTAATCTCAGTTACACTAAATCAATTTAATGGCTCTTTGTCACCCAACATGTTCCACACCCTCTCCAACCTCCAAGAACTTGAGATTGGTGGGAATCAACTCTCAGGACCAATCCCATCTTCCATAACAAATTCATCCATCGTTTCAGAACTTACTATGATTGACAACAATTTTTTTGGGCATGTTCCTAGTATGGGGAAGCAAATACATCTTCAGTATCTAAATTTAGATGGAAACAATCTAGGTTACAATTCACCTAATGATTTGGAGTTTATAAAATCATTGGCAAACTGCAGTGAGTTGCAAGTGTTGTCTTTGGATTACAATAATTTTGGAGGTCGTTTGCCAAATTCTTTGGGCAATTTATCCACCCAACTTAGTGAATTGTTTCTCGGGGGCAACCAAATATCAGGAGAAATTCCAGCCCCATGTGGAAATCTAATTGGCTTAACTCTTTTGACAATGGAACATAACCTCATTGATGGAATTATTCCAACAACTTTTGAGAAGCTTCAGAAGTTGCAAGTGTTATCCTTAAGAACAAACAAAATCTCAAGCTTAGGAACCTTCATAGGCAATCTCAGTCAATTGTATTATTTTGACGTGGCGGAAAACATGTTAGAAGGAAGTATTCCTCCAAGTCTAGGAAATTGCCAACATTTGCAACATTTAGACCTTGCCCAGAACAACCTCACAGGAACCATACCATTGGAGGTTTTCAATATTTCTTCTCTAACTGGTGCATTGTCATTGTCACAAAACTTGTTGACTGGTAATATACCAGGAGAAGTGGGCAACCTAAAAAATCTCAACTCACTATCTTTGTTTGGGAATCGCCTGTCTAGTCGCATTCCAGAAACTATTGGAGAATGCGTAATGTTGGAGCACCTCTATTTGCAAGGGAATTCTTTACAAGGAAGCATCCCATCTTCTTTGGCATCACTCAAAGGTCTTCAAAGTTTAGACCTCTCGCGGAACCTCTTGTCTGGATCAATTCCTAGTGTTCTGCAGAGCATTTCTTTGTTGCAATATTTCAATATATCATTTAACATGTTGGATGGTGAGGTACCAACTAAAGGCGTATTTAGTAATGCAAGTGGGATAATTGTGACTGGAAATAGTAAGCTTTGTGGAGGTATTTCAGAGCTGCATCTACCATCATGTCCTGTCAAAGCTGCAAAACTAGCAAAACATCCCTCTCTCAGGTTGATAGCAATTATAGTAAGTGTAGTTGCTTTTCTTCTCATATTGTTGGTTATTCTAACAGTCTACTGGATGAGGAAAAAGAGTAATAAACCGTCTTTGGATTCACCATCAATTGACCAACTGACTAAAGTTTCATACCAAAGCCTACACAATGGAACAAATGGGTTCTCAACTTCAAACTTGATAGGACATGGAAACTTTAGCTCTGTATATAAAGGAACTCTTGAGCAAGAAGACAAGATTGTTGCCATAAAGGTCCTAAACCTTCAAAAGAAAGGAGCTCACAAAAGTTTCATTCTTGAATGCAATGCACTTAAAAATATTAGACATCGAAATTTGGTTCAGACTTTGACTTGTTGCTCTAGCACAGATTACGAAGGTCAAGAATTTAAAGCTCTAATTTTTGAGTATATGACAAATGGAAGTTTAGAACAATGGATTCATCCTGGGACACCAAGTGCACAACATCTGACAACATTGAGCTTTGATCAACTATTAAACATCACAATTGATGTTGCTTCCGCATTGCATTATCTTCACCATGAATGTGAACAATCGATCATTCACTGTGATATAAAGCCAAGCAATGTCCTTCTTGATGATAACATGATTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTTTGTCAACTTTCAATGACACCACTTCTAAGCAAACAAGTACAAATGGAATAAAGGGGACAATTGGCTATGCTCCCCCAGAGTATGGAGCGAGTTATGAGGTGTCAACTTATGGTGATGTGTACAGTTTTGGAATTCTTATACTAGAAATGCTTACGGGAAGAAAACCTACAGATGAAATGTTTAAAGATGGTCAAAATCTTCGTAACTTTGTTGCAATTTCATTTCCTGATAATATTTTGCAGATATTGGACCCAAGAGTTATTTCAGAGTACGAAGCAACTACAATGGAAGGAAACTATTGTAATATCAATCCAAAGGTTGAAAAGTGTGTGGTTTCACTTTTTAGAATTGGACTTGCTTGCTCTGTGGAATCACCAAAAGAAAGAATGAATTTCGTTGACGTTACTAGAGAGCTTAATCAGATCAGAAAGGTCTTTTTTTGCAGGGGATGA 3072 0.3727 MKYFSLTLLTFWSILIHLFSLFIFKSLWFTPNITAFASGNETDHFALLKFKESISTDPNKILFSWNTSSHFCNWHGITCDSMLQRVTKLNLEGYKLKGFISPHIGNLSHMTTFTIGRNNFYGELPQELGQLSKLQYLSVANNSFLVGKIPSNLTACTNLKILHLGGNNFTGKIPVEIGSHQKLQQLFLYKNNLSGIIPSFIGNLSSLSRLSLGYNNFEGDIPQEICHLKSLIVLSLPVNKLTGTFPSCFYNMSSLTLISVTLNQFNGSLSPNMFHTLSNLQELEIGGNQLSGPIPSSITNSSIVSELTMIDNNFFGHVPSMGKQIHLQYLNLDGNNLGYNSPNDLEFIKSLANCSELQVLSLDYNNFGGRLPNSLGNLSTQLSELFLGGNQISGEIPAPCGNLIGLTLLTMEHNLIDGIIPTTFEKLQKLQVLSLRTNKISSLGTFIGNLSQLYYFDVAENMLEGSIPPSLGNCQHLQHLDLAQNNLTGTIPLEVFNISSLTGALSLSQNLLTGNIPGEVGNLKNLNSLSLFGNRLSSRIPETIGECVMLEHLYLQGNSLQGSIPSSLASLKGLQSLDLSRNLLSGSIPSVLQSISLLQYFNISFNMLDGEVPTKGVFSNASGIIVTGNSKLCGGISELHLPSCPVKAAKLAKHPSLRLIAIIVSVVAFLLILLVILTVYWMRKKSNKPSLDSPSIDQLTKVSYQSLHNGTNGFSTSNLIGHGNFSSVYKGTLEQEDKIVAIKVLNLQKKGAHKSFILECNALKNIRHRNLVQTLTCCSSTDYEGQEFKALIFEYMTNGSLEQWIHPGTPSAQHLTTLSFDQLLNITIDVASALHYLHHECEQSIIHCDIKPSNVLLDDNMIAHVSDFGIARLLSTFNDTTSKQTSTNGIKGTIGYAPPEYGASYEVSTYGDVYSFGILILEMLTGRKPTDEMFKDGQNLRNFVAISFPDNILQILDPRVISEYEATTMEGNYCNINPKVEKCVVSLFRIGLACSVESPKERMNFVDVTRELNQIRKVFFCRG* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01652 1023 SUPERFAMILY L domain-like 380 634 - -
Lapu2g01652 1023 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 796 1022 - -
Lapu2g01652 1023 Pfam Leucine Rich repeat 156 172 IPR001611 GO:0005515
Lapu2g01652 1023 Pfam Leucine Rich repeat 473 489 IPR001611 GO:0005515
Lapu2g01652 1023 Gene3D Transferase(Phosphotransferase) domain 1 796 1019 - -
Lapu2g01652 1023 ProSiteProfiles Protein kinase domain profile. 714 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01652 1023 SMART LRR_typ_2 204 228 IPR003591 -
Lapu2g01652 1023 SMART LRR_typ_2 157 180 IPR003591 -
Lapu2g01652 1023 SMART LRR_typ_2 427 450 IPR003591 -
Lapu2g01652 1023 SMART LRR_typ_2 474 498 IPR003591 -
Lapu2g01652 1023 SMART LRR_typ_2 131 156 IPR003591 -
Lapu2g01652 1023 SMART LRR_typ_2 523 547 IPR003591 -
Lapu2g01652 1023 SMART LRR_typ_2 571 594 IPR003591 -
Lapu2g01652 1023 SMART LRR_typ_2 403 426 IPR003591 -
Lapu2g01652 1023 SMART LRR_typ_2 277 301 IPR003591 -
Lapu2g01652 1023 Gene3D Ribonuclease Inhibitor 193 251 IPR032675 -
Lapu2g01652 1023 Gene3D Ribonuclease Inhibitor 252 322 IPR032675 -
Lapu2g01652 1023 SMART LRR_sd22_2 131 155 - -
Lapu2g01652 1023 SMART LRR_sd22_2 427 452 - -
Lapu2g01652 1023 SMART LRR_sd22_2 379 394 - -
Lapu2g01652 1023 SMART LRR_sd22_2 474 495 - -
Lapu2g01652 1023 SMART LRR_sd22_2 277 303 - -
Lapu2g01652 1023 SMART LRR_sd22_2 180 206 - -
Lapu2g01652 1023 SMART LRR_sd22_2 571 597 - -
Lapu2g01652 1023 SMART serkin_6 714 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01652 1023 Pfam Leucine rich repeat 233 290 IPR001611 GO:0005515
Lapu2g01652 1023 Pfam Leucine rich repeat 550 608 IPR001611 GO:0005515
Lapu2g01652 1023 Pfam Leucine rich repeat 405 462 IPR001611 GO:0005515
Lapu2g01652 1023 FunFam LRR receptor-like serine/threonine-protein kinase EFR 343 650 - -
Lapu2g01652 1023 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 401 1017 - -
Lapu2g01652 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Lapu2g01652 1023 SUPERFAMILY L domain-like 40 337 - -
Lapu2g01652 1023 Gene3D Ribonuclease Inhibitor 39 192 IPR032675 -
Lapu2g01652 1023 Gene3D Phosphorylase Kinase; domain 1 695 795 - -
Lapu2g01652 1023 Gene3D Ribonuclease Inhibitor 323 651 IPR032675 -
Lapu2g01652 1023 Pfam Protein kinase domain 716 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01652 1023 SUPERFAMILY Protein kinase-like (PK-like) 688 1012 IPR011009 -
Lapu2g01652 1023 FunFam LRR receptor-like serine/threonine-protein kinase EFR 684 795 - -
Lapu2g01652 1023 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
Lapu2g01652 1023 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Lapu2g01652 1023 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 42 154 - -
Lapu2g01652 1023 FunFam Piriformospora indica-insensitive protein 2 173 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01652 Lapu-Chr2 30292840 30296587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01652 40 1020 Receptor kinase-like Gene Family AT3G47570 45.015 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lapu2g01652 Pkinase 7.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01652 - - gmx:100801459 1433.7