Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01641 ATGGATCCGTTCAGAGGATCCGAACCCGAAAACCCTATCACCACTTGCCTTTCCATGCTCTCCCTCCGCCGCTTCTCCGCCTGCCGCGACTTTGCCCTCCGCCTCCCTCCCACCGAAACCGTTGCACGGGTCCTCGCCGTCGCCAACGTCCTCTCCGCCGCTGACTTCTACTCCGTTCTCCAGCTCCACCCCTCCGACGGTGCCAACCGCGACCTTGCACGGCGGCAGTACGCGAAGCTGGCGCTCCTCCTGGACCCAACGAGTCCTGACAAGTTCCCCTTTTCCGACGAGGCCCTCGCACGTGTGCAGGAATCCTGGCATGTGCTCTCCCATCCCGAACGCCGCGCCCTCTACGACGGCGAGCACCCAGTCCCCACCACGGCGACGTTTTGGAGCGCATGCCCCTACTGCTGGAACCTCTTCGAGTACGAGAAGAGGTACGAGGATTGCGCGCTGCTGTGCCAGGTTTGCGGGAAGGCGTTCCAGGGCGTGGCGGTGGTGCCGCCGACTATGATGGGAGATGCAGTGGTTGAGGGGAAGGAGCTCCGGCAGTACTATTCATGCACGGCGAGTGTGCCCTTGAGGTATTACGAGGTCAAGGAGGAGATCAAGGGTAGCAACGTTTTTGGTGAACAAAATGCTGCTTCGTTTGTGTACATTTCTGATGATGATAATGAAGGCTTTGTCATGAGAAATGAAGGGTTGCAAGGGAATGGTGAGAAGCGGCGTATGAGGGTAAAGACTGTGGCGAAGAAGGTTAGAGCGAACAGGACGCGGAAGCCTCTTGATAGTGACTCGGATTTGGATTTGGGTGAGGAAGATGATGAATTGGTGTTCACTGAAGGGGATGATGATGTCTTTGTTGGTGTGCGATCTCGAAAGTGA 885 0.5751 MDPFRGSEPENPITTCLSMLSLRRFSACRDFALRLPPTETVARVLAVANVLSAADFYSVLQLHPSDGANRDLARRQYAKLALLLDPTSPDKFPFSDEALARVQESWHVLSHPERRALYDGEHPVPTTATFWSACPYCWNLFEYEKRYEDCALLCQVCGKAFQGVAVVPPTMMGDAVVEGKELRQYYSCTASVPLRYYEVKEEIKGSNVFGEQNAASFVYISDDDNEGFVMRNEGLQGNGEKRRMRVKTVAKKVRANRTRKPLDSDSDLDLGEEDDELVFTEGDDDVFVGVRSRK* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01641 294 SUPERFAMILY Chaperone J-domain 46 120 IPR036869 -
Lapu2g01641 294 ProSiteProfiles dnaJ domain profile. 55 122 IPR001623 -
Lapu2g01641 294 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 261 - -
Lapu2g01641 294 Pfam DnaJ domain 55 119 IPR001623 -
Lapu2g01641 294 CDD DnaJ 55 110 IPR001623 -
Lapu2g01641 294 Gene3D DnaJ domain 50 122 IPR036869 -
Lapu2g01641 294 MobiDBLite consensus disorder prediction 254 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01641 Lapu-Chr2 30132461 30133345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01641 7 196 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.075 4.60e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01641 - - gsj:114406356 410.994