Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01636 ATGGCTCACAACTCAGAGAACAGTAGCACCTGCTTTGATGATGATTTTGAAGGTGATGTTGCAGATGGTTCTAGAGTCTTGCATTCCTGGAACCACTGGAATCTTGACTCTGGACATGAAGGTGGTGGTAGATCGGAGGCATTAGCATGTACCGTGCCACAGACTGAGGAAACTGTGAGGGCTATGGTGGAGAGAGAGAGGGAGCATTTCCCGAGGGTTGATTACTTGCAGAGGCTGAGGAGTGGGAATTTGGACTTGGGTGTTAGGAGAGATGCACTTGATTGGATTTGGAAGGCTCATGCTTATTTTGGCCTTGGACCCTTGAGTTTTTGTTTAGCTGTGAACTACTTGGATCGCTTCCTATCGGTTTTTGACTTACCGAAAGGGTTAAGTTGGACTGTGCAATTGTTAGCCGTTGCTTGCTTGTCAATTGCAGCTAAAATGGACGAGATTAGAGTACCTCAATCTGTAGATTTACAGGTTGGGGAACCAAAGTTTGTGTTTGAAGCTAAAACCATTCAAAAAATGGAACTACTGGTATTAACCAAATTGAGATGGAAAATGTGTGCATTAACTCCTTATTCCTTCATAGACTACTTCCTTGGCAAGATCACTTGTGAGAAGCACCCAACAAAATCATCCATTGCAATATCAGTGCAGCTCATCCTCGGTATAATCAGAGGTATTGACTTCTTGGAATTCCGGCCTTCTGAAATTGCTGCCGCGGTGGCAATTTCTGTTTTAGGAGAATTGCAAGGGAAAGATATTGATAAGTCCATTGCTGACCTCTTTATAGTAGAGAAGGGTAGAGTTCTAAAGTGTGTTGAATTGATAAGAGATTTGTCCTGGAACAATGTTGCTGCTAGTGTAGGCAGCAAGGTGCCACATGTGCCCCAAAGTCCTATGGGGGTGATGGATGCTGGGTGCTTAAGTTATAAGAGTGATGAATTAACAGTTGGATCATGTCTAAATTCTTCACATGATAGTCCAAATCCAAACACAAAGAGGAGCAAACCAGATGGACCTTCTAATGGAACCTCCAAGTGA 1047 0.4336 MAHNSENSSTCFDDDFEGDVADGSRVLHSWNHWNLDSGHEGGGRSEALACTVPQTEETVRAMVEREREHFPRVDYLQRLRSGNLDLGVRRDALDWIWKAHAYFGLGPLSFCLAVNYLDRFLSVFDLPKGLSWTVQLLAVACLSIAAKMDEIRVPQSVDLQVGEPKFVFEAKTIQKMELLVLTKLRWKMCALTPYSFIDYFLGKITCEKHPTKSSIAISVQLILGIIRGIDFLEFRPSEIAAAVAISVLGELQGKDIDKSIADLFIVEKGRVLKCVELIRDLSWNNVAASVGSKVPHVPQSPMGVMDAGCLSYKSDELTVGSCLNSSHDSPNPNTKRSKPDGPSNGTSK* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01636 348 FunFam D2/4-type cyclin 72 184 - -
Lapu2g01636 348 FunFam D6-type cyclin 185 276 - -
Lapu2g01636 348 SMART cyclin_7 94 182 IPR013763 -
Lapu2g01636 348 SUPERFAMILY Cyclin-like 51 188 IPR036915 -
Lapu2g01636 348 PANTHER CYCLINS 51 280 IPR039361 -
Lapu2g01636 348 MobiDBLite consensus disorder prediction 321 348 - -
Lapu2g01636 348 SMART Cyclin_C_2 191 313 IPR004367 -
Lapu2g01636 348 Gene3D - 72 189 - -
Lapu2g01636 348 CDD CYCLIN_AtCycD-like_rpt2 192 278 - -
Lapu2g01636 348 ProSitePatterns Cyclins signature. 89 120 IPR006671 -
Lapu2g01636 348 Pfam Cyclin, N-terminal domain 59 189 IPR006671 -
Lapu2g01636 348 Gene3D - 61 277 - -
Lapu2g01636 348 Pfam Cyclin, C-terminal domain 192 285 IPR004367 -
Lapu2g01636 348 CDD CYCLIN_AtCycD-like_rpt1 88 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01636 Lapu-Chr2 30078764 30081338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01636 54 259 Core Cell Cycle Gene Families AT5G65420 60.577 9.53e-88 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01636 K18810 - gmx:100794010 537.339