Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01624 ATGCTCCGATCAGCTCAATCCGCTTCCAAACCTCCCAAATCCACCATCAAATTCCTCTGCAGTTACGGCGGCAGAATCCTCCCTCGCTACCCCGACGGCAAGCTTCGCTACCTCGGCGGCCACACCCGCGTCCTCGCCGTCGACCGCTCTATTCCCTTCTCCGAGCTACTGCTGAAGCTGGAAGAGCTCTGCGGTGCCTCCGTCAGACATCTCCGCTGCCAATTACCCTCCGAAGATCTCGACGCTCTCATCTCCATCACCTCCGACGAAGATCTCGCAAATCTCATTGAGGAATACGACCGCGTTTCTTCGCTCAAGATCAGAGCCTTCCTCTCGCCGCCCACGCCGCCAAGATCTCCGAACAACGCTTCCATTCCTCCGTCGAAATCGGCCTCATTCTCTTCCTCCTCAGCCTCATCATCGTCGTCGTCTTCGTCGTATTGCAGCCCTACCGGCGGCGCTGATCGGAGTTACAGAACTCCGGCACAGGTGGTAGACCGTTGTGTCCATCAGATATCGCCGGCGCCAGCGTATCGGGTGGCCGTGGAGAAATCAAAATCCTCCGGTAGGAATATTCCTCTCCCGCGCTACGGTTACCACGGGAGCGGTGGCCAGGTTTACCTGATCCACAACGGGAACCACTGGCAATAG 651 0.5791 MLRSAQSASKPPKSTIKFLCSYGGRILPRYPDGKLRYLGGHTRVLAVDRSIPFSELLLKLEELCGASVRHLRCQLPSEDLDALISITSDEDLANLIEEYDRVSSLKIRAFLSPPTPPRSPNNASIPPSKSASFSSSSASSSSSSSSYCSPTGGADRSYRTPAQVVDRCVHQISPAPAYRVAVEKSKSSGRNIPLPRYGYHGSGGQVYLIHNGNHWQ* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01624 216 SMART PB1_new 30 114 IPR000270 GO:0005515
Lapu2g01624 216 Pfam PB1 domain 32 113 IPR000270 GO:0005515
Lapu2g01624 216 Gene3D - 34 112 - -
Lapu2g01624 216 SUPERFAMILY CAD & PB1 domains 32 119 - -
Lapu2g01624 216 MobiDBLite consensus disorder prediction 112 159 - -
Lapu2g01624 216 PANTHER OS05G0427100 PROTEIN-RELATED 6 158 - -
Lapu2g01624 216 MobiDBLite consensus disorder prediction 124 153 - -
Lapu2g01624 216 CDD PB1_UP2 19 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01624 Lapu-Chr2 29880221 29881112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01624 16 111 MAP Kinase Kinase Kinase AT5G57610 51.485 3.56e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01624 - - gmx:100810685 330.872