Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01613 ATGCCTTCTCTAACTTCACTTCTTTCTCTTCTGATCCCTCTTCTTGCAGCTTCTTGTGCAAGTGTAACAGTGTTTTCCTTCCAAGCTTCCCTTAAAACAACTTACTTGGAACCTTTCAGATGCTCCTCTAAGATCAGAACATGCAATGCCTCACTCTACCACATAAGCTACAGTCACAACGCAGATGACATAGCCAACTTTTACTCCGTTAACCCCTCCCAAATCAAACCTGTAATGCGTGGCACGATGCAAGATTACCTTATAACAGTGCCTTGTTCTTGCAATAACACCAATGAACTTGGCGGATATTTCTATGATACAACCTACAAGGTGAAGGCTAATGACTCGTTTGTGGAGATTAACAACATTGTTTACAGTGGCCAAGCCTGGCCTATTAACAGAGAAGTGGACCCAAATGAGGACTTAGCAATACATCTTCCTTGTGGATGTTCAGAAAAAAGTGACTCCCAAATTGTTGTCACGTATACAGTTCAGCGGAATGATACACCCACATCAATTGCTACTCTGCTAAATGCTACGTTAGATGGCATGGTGAGTATGAACGAAGTTCTGGCTCAGAACCCCTCATTCATAGATATTACTTGGGTGCTGTATGTTCCAAGGGAACTGAATGGGTTGGCTTCCAAAGGAAAAAAAGACAAGAAACATCATATAATCATTGGAATATTAGCGGGTGTGACATTCTTGTCAATTATTACTTTGATCATTCTCGTTGTCGTTCTTAGAAGATCCAGGGCCAATGTAGCCGCAAAAGATGATCCAAATACCATGTCTAAAAGATCAATTGGAAATAGAACTATTTCCATAAAGAACCGAGACTTTCATCCAGAACATATAGAAGATGCAACTCCATTTGAGTCAGAAAGACCAGTAATTTATACTCTAGAGGAGATTGAAGATGCTACGAATAACTTTGATGAAACACGAAGGATTGGGGTAGGTGGATACGGGAGTGTGTATTTCGGAATGTTAGAGGAGAAGGAGGTTGCTGTAAAGAAGATGAGGTCTAATAAGTCCAAAGAATTCTATGCAGAACTCAAGGCCTTGTGTAAGATCCATCACATTAACATTGTGGAGTTGTTGGGATATGCTAGCGGAGATGACCACCTTTATTTGGTGTATGAGTATGTTCCAAATGGATCTCTCAGTGAGCACCTTCATGATCCATTACTGAAAGGTCACCAGCCTCTTTCTTGGTGTGCTAGGATTCAAATTGCATTGGATGCAGCAAAAGGTCTTGAATACATACATGATTACACGAAAGCACGATATGTGCATCGTGATATAAAGACTTGTAATATTCTCCTTGATGAGAAGCTCAGAGCAAAGGTAGCAGATTTCGGACTTGCAAAGCTAGTAGAACGAACCAATGATGAAGAATTCATAGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCACCAGAGTAG 1452 0.4098 MPSLTSLLSLLIPLLAASCASVTVFSFQASLKTTYLEPFRCSSKIRTCNASLYHISYSHNADDIANFYSVNPSQIKPVMRGTMQDYLITVPCSCNNTNELGGYFYDTTYKVKANDSFVEINNIVYSGQAWPINREVDPNEDLAIHLPCGCSEKSDSQIVVTYTVQRNDTPTSIATLLNATLDGMVSMNEVLAQNPSFIDITWVLYVPRELNGLASKGKKDKKHHIIIGILAGVTFLSIITLIILVVVLRRSRANVAAKDDPNTMSKRSIGNRTISIKNRDFHPEHIEDATPFESERPVIYTLEEIEDATNNFDETRRIGVGGYGSVYFGMLEEKEVAVKKMRSNKSKEFYAELKALCKIHHINIVELLGYASGDDHLYLVYEYVPNGSLSEHLHDPLLKGHQPLSWCARIQIALDAAKGLEYIHDYTKARYVHRDIKTCNILLDEKLRAKVADFGLAKLVERTNDEEFIATRLVGTPGYLPPE* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01613 483 FunFam Kinase family protein 287 383 - -
Lapu2g01613 483 FunFam Os07g0541700 protein 384 476 - -
Lapu2g01613 483 Gene3D Phosphorylase Kinase; domain 1 291 383 - -
Lapu2g01613 483 ProSiteProfiles Protein kinase domain profile. 312 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01613 483 SUPERFAMILY Protein kinase-like (PK-like) 295 483 IPR011009 -
Lapu2g01613 483 Gene3D Transferase(Phosphotransferase) domain 1 384 483 - -
Lapu2g01613 483 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Lapu2g01613 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Lapu2g01613 483 SUPERFAMILY LysM domain 160 207 IPR036779 -
Lapu2g01613 483 Pfam Protein kinase domain 313 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01613 483 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 39 483 IPR044812 GO:0019199|GO:0045087
Lapu2g01613 483 SMART serkin_6 312 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01613 483 Gene3D LysM domain 153 213 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01613 Lapu-Chr2 29725385 29730154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01613 283 483 Receptor kinase-like Gene Family AT1G51940 60.697 4.07e-80 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lapu2g01613 Pkinase 2.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01613 - - gmx:100800907 808.135