Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01568 ATGGAAGAACATCTCACTCCACTGGCTGTTACCCATCTCCTTCAACACACTCTCAGAAGTTTGTGCATCCATGAAAATTCCCAATGGGTCTATGCAGTCTTCTGGAGGATTTTGCCAAGAAACTACCCTCCACCCAAGTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAATTGGATATTGGTGTGGGAAGATGGTTTCTGCAACTTTGCTGCATCGGCTGCTCCTGAAATCAACTCTGGAGATTGTCCTACCTCATCGGTTTATGGGAACTGTGAATTTCAGCCCTACCAAGGACTGCAACCGGAACTCTTCTTCAAGATGTCCCATGAGATCTATAACTACGGAGAAGGGTTGATAGGAAAAGTAGCTGCAGATCACAGCCACAAGTGGATATACAAAGAGCCTAATGATCAAGAAATCAACTTCTTGTCAGCATGGCACAATTCAGCAGATTCGCACCCTAGGACTTGGGAAGCCCAGTTTCTGTCTGGTATAAAGACCATAGCCCTCATTGCTGTAAGAGAAGGTGTCGTTCAATTAGGAGCTGTCCACAAGGTGATTGAAGACCTGAGCTATGTGGTTCTTTTAAGAAAAAAGTTCAGCTACATCGAGAGCATCCCTGGTGTGCTGTTGCCACATCCATCATCTTCTGCATACCCTTATAAAGTAGAAGGAGGGTATGGAGTTCCAGAACAATGGCATTTCCAAGGCAACCACCTTGCACCCCAAACTGAGTTATATGACAACCACTTCAACTTGCCACTTAAGATAACTCCCTCAATGAGCAGTCTGGAGGCACTTCTCTCTAAGCTCCCCTCAGTGGTGCCACCACCACATCCAACACAACCACAGTCCCATCATCAACTCCTGCCATCACCCCAGCAAAGGCCATTGGAGTTCATGGGATCAATGCAAAAAGTGGCAAAGGAAGAATTGGAAGAAGAGGTATACAGGCCAGAACTTGACATAGGTGAGAGTAGCAGTTCCATGCCAGGGTACCACCATCAACATCACTTCCATCAAGATCAGAATAATGTATCTAGGAGTGGAGCCAACGAAGGATTTTGA 1083 0.4608 MEEHLTPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAPEINSGDCPTSSVYGNCEFQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHNSADSHPRTWEAQFLSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKVEGGYGVPEQWHFQGNHLAPQTELYDNHFNLPLKITPSMSSLEALLSKLPSVVPPPHPTQPQSHHQLLPSPQQRPLEFMGSMQKVAKEELEEEVYRPELDIGESSSSMPGYHHQHHFHQDQNNVSRSGANEGF* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01568 360 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 231 - -
Lapu2g01568 360 MobiDBLite consensus disorder prediction 277 297 - -
Lapu2g01568 360 MobiDBLite consensus disorder prediction 328 360 - -
Lapu2g01568 360 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 205 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01568 Lapu-Chr2 29159361 29161491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01568 15 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.292 2.34e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01568 - - vun:114173114 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01568 2 29159361 29161491 Lapu2g01568 2 29159361 29161491 ECH