Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01565 ATGCAGAGCGCAAAGGTAACCACAGTGATGGTTGTGTCCCTGTTTTTGTCTGTGGGTTTGAACACTCTCGTGAAAGCAAACATGTCCAAAGGCATGAGCAATTACGTTTTCGTTGCTTATTCCAACCTCCTCGGATTCTGTCTCCTGCTAATTGGAACCACCCTTCATTACAGGAACAGATCCCCCACACCGCTCAATAACTCCATTCTCTTCAGAACTTTTCTCATCGGCTTCCTCAGCGTTTCTATCCAGACGCTTATTTATGCTGGGCTTGGATATAGCTCCCCCACTCTCACCTCTACCATTGAAGATCTTCTTCCAGCTTTTACTTTCTTAATTGCCATTGTTTTCAGGATGGAAAAGCTTGACCTAAAAGTAAGAAGCTGCCAAGCAAAAGCCATTGGGACTGTAGTCTCAATTGGAGGGGCATTAATAGTGACTTTATACAAAGGTTTGGCTGTGACAAGTGCTGTCATGCCAAACACTTCATTTCTCTCATCTCAACCATCACAATGGTTACTAGGAGGCTTTCTCCTCACAACTGGTACTTTTTGTGGTTCAGTCTCACTTATTATCCAGACATGGACTATTAAGGACTACCCAGAGGAGCTAATGCTAATAACCATAGGTACTAGTTTCTCTGTAATCCTATCTTTCGTAGTGGCTTTCGTTGCAGAGGAAAATCCTAAGGCATGGATACTTAAGCCTGATATGGAATTGGTGTGCATATTCTACTCAGGCATTGTAGTGCTGTCTACACGAAATGTGGTGTATGCATGGGCATGCAGAAAGAAGGGACCTGTGTATGTTGCTATGTTCAGTCCTTTAGGAATTGTGATTGCACTTGCTATGGGGATTGTATTTTTGGGAGACACTCTATATCTTGGAAGTGTGATAGGAGCTGCTATAATAGCTATTGGGTTTTATGCTGTAATATGGGGTCAGGCTCAAGAGGAAAATATGACTTATGAAAAACATGGAACCTGTAGCATTATCTCATCGTCATCATCGACATCTTCTGAAGCCCTCTTGCTGAATAGAAACAAAGACACAACGATGGCATGA 1065 0.4263 MQSAKVTTVMVVSLFLSVGLNTLVKANMSKGMSNYVFVAYSNLLGFCLLLIGTTLHYRNRSPTPLNNSILFRTFLIGFLSVSIQTLIYAGLGYSSPTLTSTIEDLLPAFTFLIAIVFRMEKLDLKVRSCQAKAIGTVVSIGGALIVTLYKGLAVTSAVMPNTSFLSSQPSQWLLGGFLLTTGTFCGSVSLIIQTWTIKDYPEELMLITIGTSFSVILSFVVAFVAEENPKAWILKPDMELVCIFYSGIVVLSTRNVVYAWACRKKGPVYVAMFSPLGIVIALAMGIVFLGDTLYLGSVIGAAIIAIGFYAVIWGQAQEENMTYEKHGTCSIISSSSSTSSEALLLNRNKDTTMA* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01565 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 150 - -
Lapu2g01565 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 316 - -
Lapu2g01565 354 Pfam EamA-like transporter family 10 147 IPR000620 GO:0016020
Lapu2g01565 354 Pfam EamA-like transporter family 175 312 IPR000620 GO:0016020
Lapu2g01565 354 PANTHER WAT1-RELATED PROTEIN 7 326 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01565 Lapu-Chr2 29099111 29105236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01565 8 350 Nodulin-like Gene Family AT3G28050 42.776 1.27e-81 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01565 - - gmx:100792641 528.865