Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01563 ATGACGAGAGTGGGAAATGGAACTGGCAAATTACTGCCATTTGTTGGAATGATGGTGGCTATGCTAACTCAAAGTGGTAGCATGGTGGTAATCAAAGTTGCCATTGATGATATCAACAAATATGTTATGGTTGTCTACACTTTTGCACTCTCCACAATCTTGGTTCTTCCCTACGTCTTGTATATTCACAGGAGGCCAGGAAATCCTCCTTACACATTTTCTGTACTCTGCAGACTCTTTTTGCTTGCACTCTTCGGGAGTTTAGGAACTATAGTAGCTTATGTTGGCATAGATCTGAGTTCGCCTACACTTTTATCAGCCATTCTTAACCTCCTTCCAGCTTTCACTTTTATACTTGCTCTCATGTTCAGGATGGAAGAAGTACGTTGGAGGAGTGCTAGCAGCCAAGCTAAAGTGTTAGGAACATTAGTATCAATTGCAGGAGCATTTGTTGCGATACTGTACAAAGGTCCACTCATCTTTAAGACACATTCATCAAACATTTCTAACCAAATACTTCAATTTTCGCCACAGCTAAATTGGATCTTTGGAGGGATATCATGTGTTGCCGATGCACTCTTTACTTCCATGTGGTACATATATCAGGCTTCTGTGGGAGAGAGATACCCTGCTATAGATGTATCAGTGATTGTGTTCTTCCAACTCTTATTTTCAACAGTGCAGTGTGGAGCATTTGCCTTAGTTGCTGTGAGGGATCTAGCTGAATGGAAGCTCGGAATGGATATAGGTGTGATTGGCATTCTATATCAGGCAATAATTGCAACATTGTTGCGATACCTTCTATGCATGTGGTGCATAGTGAAAGCAGGCCCTTTGTTCTGTGCTCTATTCCAACCTGTGGCAATCATTTTCACAGCTTGGATGGGTGCAATCTTTCTTGGAGATGATTTCAGTCTTGGAAGTTTGATTGGTGCTGTTATAATAGTGATAGGATTTTATGCTGTACAATGGGGAAAATCTAAAGAGGAGAATGAGATTGCAAAAGGGGTTGAGAACTTGGACTTGGAGTCACATGATGCTCCTTTATTGCAGAATAGCAGCAAGTAG 1068 0.4129 MTRVGNGTGKLLPFVGMMVAMLTQSGSMVVIKVAIDDINKYVMVVYTFALSTILVLPYVLYIHRRPGNPPYTFSVLCRLFLLALFGSLGTIVAYVGIDLSSPTLLSAILNLLPAFTFILALMFRMEEVRWRSASSQAKVLGTLVSIAGAFVAILYKGPLIFKTHSSNISNQILQFSPQLNWIFGGISCVADALFTSMWYIYQASVGERYPAIDVSVIVFFQLLFSTVQCGAFALVAVRDLAEWKLGMDIGVIGILYQAIIATLLRYLLCMWCIVKAGPLFCALFQPVAIIFTAWMGAIFLGDDFSLGSLIGAVIIVIGFYAVQWGKSKEENEIAKGVENLDLESHDAPLLQNSSK* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01563 355 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020
Lapu2g01563 355 Pfam EamA-like transporter family 184 321 IPR000620 GO:0016020
Lapu2g01563 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 328 - -
Lapu2g01563 355 PANTHER WAT1-RELATED PROTEIN 13 335 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01563 Lapu-Chr2 29077788 29081039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01563 8 331 Nodulin-like Gene Family AT5G40240 39.091 6.02e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01563 - - gmx:100792109 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01563 2 29077788 29081039 Lapu2g01563 2 29077788 29081039 ECH
Lapu2g01563 2 29077788 29081039 Lapu3g01099 3 11820697 11823569 ECH