Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu2g01561 | ATGTTGCTAGAACCTGACACTTCATTTCTCAAACAGAGAAGATATAAGATAGAGCAATCAATCATGCCATTTGGTTTGGTCTCAGCCTGGAACAAGCGCCGGAGAAGCAAATCTCAAGAGCACACAGATCCCTGGGTTTACAAACCTGCACAGCTTTGGCAACTTGAAGATCAGGTGCCGCGACCTACAAAAAGGCTACATGGATCATCTGTTTTCACACTCAAGGAGATGGAAGAGGCAACATGTTCATTCAGTGATGAGAATCTGCTTGGAAAAGGAGGATTCGGCAAAGTCTACCGAGGCACATTGCGGTCAGGAGAGGTTGTAGCAATCAAGAAAATGGAGTTGCCTGCAATTAAAGCAGCAGAGGGGGAACGTGAGTTCCGAGTTGAAGTTGACATCTTAAGCAGACTTGACCACCCAAATCTTGTTTCTTTGATAGGCTACTGTGCCGATGGAAAGCATCGATTCCTAGTATATGAATATATGCGTAATGGAAACCTGCAAGATCATTTGAATGGAATAGGAGAAAGAAACATGGATTGGCCTCGAAGACTCCAAGTTGCACTTGGAGCTGCAAAAGGGCTTGCTTATCTTCATTCAAGTTCTGATGTTGGAATTCCTATTGTTCATAGGGATTTCAAATCGACCAATATTCTCTTAAATGACAACTTTGAAGCAAAGATATCTGATTTTGGTCTCGCCAAGTTAATGCCAGAAGGACAAGAAACACATGTGACTGCCAGAGTACTTGGTACCTTTGGCTATTTTGATCCTGAGTATACATCGACTGGAAAACTCACTCTGCAAAGTGATGCTTATGCTTTTGGTGTTGTTCTTTTGGAGCTTTTGACTGGACGTCGAGCCGTAGATCTAAACCAAGGTCCCAATGATCAAAACCTTGTACTACAGGTGAGGAACATACTGAATGACCGCAAGAAGCTCCGGAAGGTGATAGATCCAGAGATGGCTCGAAATTCATACACCATTCAGTCTATAGTCATGTTTGCCAATCTGGCATCAAGATGTGTTCGAACTGAGAGTAATGAGAGACCATCAATGGCAGAATGTGTAAAAGAACTCCTAACAATTATCTATACAAATTCAAAAGGCTTGGGTATGGTTATGCATACTTTGAGAATGATCTAA | 1149 | 0.423 | MLLEPDTSFLKQRRYKIEQSIMPFGLVSAWNKRRRSKSQEHTDPWVYKPAQLWQLEDQVPRPTKRLHGSSVFTLKEMEEATCSFSDENLLGKGGFGKVYRGTLRSGEVVAIKKMELPAIKAAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMRNGNLQDHLNGIGERNMDWPRRLQVALGAAKGLAYLHSSSDVGIPIVHRDFKSTNILLNDNFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDAYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRNILNDRKKLRKVIDPEMARNSYTIQSIVMFANLASRCVRTESNERPSMAECVKELLTIIYTNSKGLGMVMHTLRMI* | 383 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu2g01561 | 382 | SUPERFAMILY | Protein kinase-like (PK-like) | 70 | 367 | IPR011009 | - | |
Lapu2g01561 | 382 | FunFam | serine/threonine-protein kinase PBS1-like | 52 | 162 | - | - | |
Lapu2g01561 | 382 | PANTHER | OS01G0750732 PROTEIN | 39 | 364 | - | - | |
Lapu2g01561 | 382 | Gene3D | Transferase(Phosphotransferase) domain 1 | 163 | 373 | - | - | |
Lapu2g01561 | 382 | ProSitePatterns | Protein kinases ATP-binding region signature. | 90 | 113 | IPR017441 | GO:0005524 | |
Lapu2g01561 | 382 | FunFam | receptor-like serine/threonine-protein kinase NCRK | 163 | 373 | - | - | |
Lapu2g01561 | 382 | Pfam | Protein kinase domain | 85 | 359 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu2g01561 | 382 | ProSiteProfiles | Protein kinase domain profile. | 84 | 365 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu2g01561 | 382 | CDD | STKc_IRAK | 90 | 361 | - | - | |
Lapu2g01561 | 382 | Gene3D | Phosphorylase Kinase; domain 1 | 54 | 162 | - | - | |
Lapu2g01561 | 382 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 209 | 221 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu2g01561 | Lapu-Chr2 | 29050561 | 29055328 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu2g01561 | 67 | 365 | Receptor kinase-like Gene Family | AT3G58690 | 47.039 | 2.31e-91 | 278 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIb | Lapu2g01561 | Pkinase | 3.4e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu2g01561 | - | - | aprc:113868910 | 707.212 |