Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01561 ATGTTGCTAGAACCTGACACTTCATTTCTCAAACAGAGAAGATATAAGATAGAGCAATCAATCATGCCATTTGGTTTGGTCTCAGCCTGGAACAAGCGCCGGAGAAGCAAATCTCAAGAGCACACAGATCCCTGGGTTTACAAACCTGCACAGCTTTGGCAACTTGAAGATCAGGTGCCGCGACCTACAAAAAGGCTACATGGATCATCTGTTTTCACACTCAAGGAGATGGAAGAGGCAACATGTTCATTCAGTGATGAGAATCTGCTTGGAAAAGGAGGATTCGGCAAAGTCTACCGAGGCACATTGCGGTCAGGAGAGGTTGTAGCAATCAAGAAAATGGAGTTGCCTGCAATTAAAGCAGCAGAGGGGGAACGTGAGTTCCGAGTTGAAGTTGACATCTTAAGCAGACTTGACCACCCAAATCTTGTTTCTTTGATAGGCTACTGTGCCGATGGAAAGCATCGATTCCTAGTATATGAATATATGCGTAATGGAAACCTGCAAGATCATTTGAATGGAATAGGAGAAAGAAACATGGATTGGCCTCGAAGACTCCAAGTTGCACTTGGAGCTGCAAAAGGGCTTGCTTATCTTCATTCAAGTTCTGATGTTGGAATTCCTATTGTTCATAGGGATTTCAAATCGACCAATATTCTCTTAAATGACAACTTTGAAGCAAAGATATCTGATTTTGGTCTCGCCAAGTTAATGCCAGAAGGACAAGAAACACATGTGACTGCCAGAGTACTTGGTACCTTTGGCTATTTTGATCCTGAGTATACATCGACTGGAAAACTCACTCTGCAAAGTGATGCTTATGCTTTTGGTGTTGTTCTTTTGGAGCTTTTGACTGGACGTCGAGCCGTAGATCTAAACCAAGGTCCCAATGATCAAAACCTTGTACTACAGGTGAGGAACATACTGAATGACCGCAAGAAGCTCCGGAAGGTGATAGATCCAGAGATGGCTCGAAATTCATACACCATTCAGTCTATAGTCATGTTTGCCAATCTGGCATCAAGATGTGTTCGAACTGAGAGTAATGAGAGACCATCAATGGCAGAATGTGTAAAAGAACTCCTAACAATTATCTATACAAATTCAAAAGGCTTGGGTATGGTTATGCATACTTTGAGAATGATCTAA 1149 0.423 MLLEPDTSFLKQRRYKIEQSIMPFGLVSAWNKRRRSKSQEHTDPWVYKPAQLWQLEDQVPRPTKRLHGSSVFTLKEMEEATCSFSDENLLGKGGFGKVYRGTLRSGEVVAIKKMELPAIKAAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMRNGNLQDHLNGIGERNMDWPRRLQVALGAAKGLAYLHSSSDVGIPIVHRDFKSTNILLNDNFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDAYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRNILNDRKKLRKVIDPEMARNSYTIQSIVMFANLASRCVRTESNERPSMAECVKELLTIIYTNSKGLGMVMHTLRMI* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01561 382 SUPERFAMILY Protein kinase-like (PK-like) 70 367 IPR011009 -
Lapu2g01561 382 FunFam serine/threonine-protein kinase PBS1-like 52 162 - -
Lapu2g01561 382 PANTHER OS01G0750732 PROTEIN 39 364 - -
Lapu2g01561 382 Gene3D Transferase(Phosphotransferase) domain 1 163 373 - -
Lapu2g01561 382 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Lapu2g01561 382 FunFam receptor-like serine/threonine-protein kinase NCRK 163 373 - -
Lapu2g01561 382 Pfam Protein kinase domain 85 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01561 382 ProSiteProfiles Protein kinase domain profile. 84 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01561 382 CDD STKc_IRAK 90 361 - -
Lapu2g01561 382 Gene3D Phosphorylase Kinase; domain 1 54 162 - -
Lapu2g01561 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01561 Lapu-Chr2 29050561 29055328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01561 67 365 Receptor kinase-like Gene Family AT3G58690 47.039 2.31e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Lapu2g01561 Pkinase 3.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01561 - - aprc:113868910 707.212