Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01546 ATGTCTCCTAGGAGGAGGGTGTTGTTGGAGGTGATGACATTAGATGAACAAACCTGCAAGATGGCTGAGGCTGTCATCAAAGGTGTGCTTGGAAGTTTGATCTCTCTCGCTGGAACAGAGCTGGAACCATTTCTGGGTTTCAGTGGAGAAAAGGAAAAGCTTGAGAGTATGTTCACTGCAATCCAGGCCACTCTTGAAGATGCTGAAGAGAAACAATTCTCAGACAAAGCTACAAAGGATTGGTTGGAAAAGCTGAAAGATGCAGCTTACGAGCTTGATGACATCTTGGACGAGTGTGTCTATGAACAATTGCGGCTGGAACAAGAAGCAGAAGAAGGAGAAGTCAGGTGTTGTGGATCAGAAATGGTACTAAGCTCTTCCTTATCCTCTTTTCATCCCATGAATATCTATTTCCGTTACAAGATTGCAAAAAGAATGAAGAGCTTAAGTGAGAGATTAGATCGAATTGCTAGTGAAAAGCACCGGCTTCGTTTGACTTCAACGGTTCAAGACGAAACCCGTGGAGTCCCTGAGTGGCGCCAAACCTTCTCACTTGTCACTGAAACAAAGGTCTACGGAAGAGAGAATGATATAAAAAAAGTTGTAGACTTTTTGGCAGGTGCTGCTTCTCGTGCTGAGACTCTACCCGTCTATCCGATCGTGGGTCAAGGCGGACTTGGAAAAACAACACTGGCGAAACTCATCTTCAATCACAAGGATCTTAAAGATTTTGAGTTAAAAATTTGGGTATGTGTTTCTGAAGATTTCGGTCTAGAGAGAATGTTAAAAGCTATCATCCAAGCCGCATCTAACAAGGAGGTCTACAAGGATTTGGGTCCGGAGCCAATGCAAAGAAGACTTAGAAATGTGCTTACAGGAAAAAGATATTTGCTTGTTTTGGATGACGTGTGGGATGTTATGAGACAGAATTGGGAGAAGAATTGGCAGATGTTGAGATCTGTACTGGACTGTGGGGCAAAGGGTGCTTCTGTTTTGGTCACCACTCGTTTTTCAAATGTTGCAGAAATCATGGGAACAATAAAACATCCTCATAGATTATCAGAGCTCTCCGTAGATTATTGCTGGGAATTGTTTAAACATCAAGCCTTTGGAGCAGACGAAGTAGAATCGGAAGAGTTTGTGGTGATAGGAAGGGAGATAGTAAAGAAGTGCGGAGGAGTGCCTCTCGCAGCAAATGCAATAGGAAGTCTTCTACGCTTTCACAGAAATAGGGATAAGTGGCTCAATATCATGAAAAGTAACCTTTTGACACTATCACCGAATGAAAAGTCCATAATGCCTGTCCTTAGACTAAGTTACCTGAACTTACCAATTGACCTCCGACAATGCTTTGCTTATTGTGCAATATTTCCCAAAGATGAACGCATAGAGAAGCAGTATTTAATTGAACTTTGGATGGCTAATGGATTCATTTCATCTTATGGAAGGTTAGATGCTGAGGATGCTGGTAATGATGTGTGGAATGAATTATATAGGAGATCATTTTTTCAGGATATTGAGACAGATGAATTTGGAAAAGTTGTCAGTTTCAAGATGCATGATCTTGTTCATGATCTTGCACAATTTGTTGCTGAAGAGGTTTGTTGCATTACAGACGACGATGGTGCAGCTGTCTTATTTGAAAGAAAAAGGATCCACCATGTCTCAGATTATCGGTGGTGGCTCCATTCAGCCCAGTTGAATCACGTGAAATCTTTAAGGACTTATGTAGATACCAGAACAACTGATGAACTTTCTTCTGACGTGTTGAAATGTTATTCTTTACGGCTGCTTCACTTAAGTCGATGGAAACAATTATCATCATCCATCGGTGATTTGAAACATCTAAGATACTTAAATCTTTCATACGGTGAATTCAAAACTCTTCCAGAATCGCTATGTAAATTACTGAATTTGCAGATATTGAAATTAGATTATTGTTACAGTCTGCAAAAGTTGCCCAACAGTTTGGTACGCTTAAAAGCTCTGCAACAGTTGTCTCTTAAAAACTGCAGGTCGCTATCAAGATTGCCACCTTATATAGGAAAGTTAAATTCTCTAAGGAGTTTATCCGTGTACTTTGTTAGGAAGGAAAGAGGGTTCCTTTTAGCAGAACTGGGACCACTGAAGCTTAAAAAGGATCTTGACATCAAACATCTGGAGAAAGTGAAAAGTGTAAATGATGCCAAAGAAACTAATATGTCAAGTAAGCAACTGAATAGGTTGACTTTGAGATGGGGGATATTCAGAGAGGGGGAAATAGAAAGAAATGATGAGGATGTTCTTGAAGCTCTTGAACCTGGTCCCAAGACACTTGAGAGTTTGAGAGTGGAAGGGTACCAAGGTTCCCATTTCCCTCAATGGATGTCCAGTCCTTCTTTCAGATGTTTAACTTATCTAGTGTTGTGGGGTTGCAGAAACTGTGTACAACTTCCGGTGTTGGGAAAACTACCTTGGCTGAAGAGGCTAAACATAGTGTGGGCGGAATACGTAAAATACGTGCATGAGGAGAGCTGCAATGATGATGTAGCTTTCATGGCTTTGGAATATCTATCACTCTGCAGGCTGCCAAGCCTAATGAGGTTATCACGTGAGGATGGGGAAAATGTGTAG 2613 0.4114 MSPRRRVLLEVMTLDEQTCKMAEAVIKGVLGSLISLAGTELEPFLGFSGEKEKLESMFTAIQATLEDAEEKQFSDKATKDWLEKLKDAAYELDDILDECVYEQLRLEQEAEEGEVRCCGSEMVLSSSLSSFHPMNIYFRYKIAKRMKSLSERLDRIASEKHRLRLTSTVQDETRGVPEWRQTFSLVTETKVYGRENDIKKVVDFLAGAASRAETLPVYPIVGQGGLGKTTLAKLIFNHKDLKDFELKIWVCVSEDFGLERMLKAIIQAASNKEVYKDLGPEPMQRRLRNVLTGKRYLLVLDDVWDVMRQNWEKNWQMLRSVLDCGAKGASVLVTTRFSNVAEIMGTIKHPHRLSELSVDYCWELFKHQAFGADEVESEEFVVIGREIVKKCGGVPLAANAIGSLLRFHRNRDKWLNIMKSNLLTLSPNEKSIMPVLRLSYLNLPIDLRQCFAYCAIFPKDERIEKQYLIELWMANGFISSYGRLDAEDAGNDVWNELYRRSFFQDIETDEFGKVVSFKMHDLVHDLAQFVAEEVCCITDDDGAAVLFERKRIHHVSDYRWWLHSAQLNHVKSLRTYVDTRTTDELSSDVLKCYSLRLLHLSRWKQLSSSIGDLKHLRYLNLSYGEFKTLPESLCKLLNLQILKLDYCYSLQKLPNSLVRLKALQQLSLKNCRSLSRLPPYIGKLNSLRSLSVYFVRKERGFLLAELGPLKLKKDLDIKHLEKVKSVNDAKETNMSSKQLNRLTLRWGIFREGEIERNDEDVLEALEPGPKTLESLRVEGYQGSHFPQWMSSPSFRCLTYLVLWGCRNCVQLPVLGKLPWLKRLNIVWAEYVKYVHEESCNDDVAFMALEYLSLCRLPSLMRLSREDGENV* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01546 870 PANTHER DISEASE RESISTANCE PROTEIN RP 62 853 IPR044974 GO:0006952
Lapu2g01546 870 CDD RX-CC_like 22 158 IPR038005 -
Lapu2g01546 870 SUPERFAMILY L domain-like 503 856 - -
Lapu2g01546 870 Gene3D - 440 529 IPR036388 -
Lapu2g01546 870 Gene3D - 178 348 IPR027417 -
Lapu2g01546 870 Gene3D Ribonuclease Inhibitor 562 865 IPR032675 -
Lapu2g01546 870 PRINTS Disease resistance protein signature 658 674 - -
Lapu2g01546 870 PRINTS Disease resistance protein signature 217 232 - -
Lapu2g01546 870 PRINTS Disease resistance protein signature 391 405 - -
Lapu2g01546 870 PRINTS Disease resistance protein signature 290 304 - -
Lapu2g01546 870 Pfam Rx N-terminal domain 26 110 IPR041118 -
Lapu2g01546 870 Gene3D - 25 133 - -
Lapu2g01546 870 FunFam Probable disease resistance protein At1g63360 440 529 - -
Lapu2g01546 870 Gene3D - 356 439 IPR042197 -
Lapu2g01546 870 Coils Coil 51 71 - -
Lapu2g01546 870 Pfam NB-ARC domain 195 440 IPR002182 GO:0043531
Lapu2g01546 870 Coils Coil 146 166 - -
Lapu2g01546 870 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 454 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01546 Lapu-Chr2 28836243 28839655 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01546 220 685 WRKY Transcription Factor Family AT5G45050 21.828 4.83e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01546 - - vun:114173979 1261.51