Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01529 ATGGACACAGACGGTGTCGTTTCCTTCGATCATGTCTCGCCGGAGGATTCTCACGAGGTTCATGTTTTGGCCGTCGATGACAGCCTCGTTGATCGGAAGGTCATTGAACGCTTGCTCAAAATCTCAGCTTGTAAAGTTACAGCTGTGGATAGTGGGATCAGAGCACTGCAATTTCTGGGGTTGGACGAGCAGAGAAGGACATCTGAATCTGATGGTTTTGTCCCGAGTTTGAAGGTGGATCTAATTATCACAGACTACTGCATGCCCGAGATGACCGGTTATGAATTGCTCAAGAAAATAAAGGAATCGTCCTTGTTCAGGGAAATTCCTGTAGTGATTATGTCTTCCGAAAACATTTTGCCTCGCATAGACAGATGCTTGGAGGAAGGTGCAGAGGATTTCATAGTGAAGCCAGTGAAATTATCTGACGTGAAACGGTTGAAGGGTTACATGGCAACAAGAGAGATTAAGGTTGGAAGCCATGACAGAGAAAGTGGTGTTGGTGGTGTTTGTGTTGAGATTAACAACAAAAGAAAGCTCGAAGAAGAGGAAGAGACCTCTGACATGTCATCATCGCCTCCGTCCATTTCTACTCTTTCATCATCGCCATCACCATCACCATCGCCGTCCATTTCTTCACCATCATCTTCTCCCACATCTTCACCCACCGTGCTGGCTTCTCCAATCAGACGGCTTAAAATGAGCACCACCGATTGA 717 0.463 MDTDGVVSFDHVSPEDSHEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRTSESDGFVPSLKVDLIITDYCMPEMTGYELLKKIKESSLFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMATREIKVGSHDRESGVGGVCVEINNKRKLEEEEETSDMSSSPPSISTLSSSPSPSPSPSISSPSSSPTSSPTVLASPIRRLKMSTTD* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01529 238 SMART REC_2 20 151 IPR001789 GO:0000160
Lapu2g01529 238 MobiDBLite consensus disorder prediction 189 206 - -
Lapu2g01529 238 Gene3D - 20 194 - -
Lapu2g01529 238 Pfam Response regulator receiver domain 22 144 IPR001789 GO:0000160
Lapu2g01529 238 SUPERFAMILY CheY-like 20 146 IPR011006 -
Lapu2g01529 238 MobiDBLite consensus disorder prediction 178 238 - -
Lapu2g01529 238 CDD REC_typeA_ARR 22 147 - -
Lapu2g01529 238 ProSiteProfiles Response regulatory domain profile. 21 152 IPR001789 GO:0000160
Lapu2g01529 238 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 200 IPR045279 GO:0009736
Lapu2g01529 238 MobiDBLite consensus disorder prediction 213 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01529 Lapu-Chr2 28612055 28613667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01529 14 230 Response Regulator Gene Family AT1G59940 56.757 4.98e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu2g01529 Response_reg 1.1e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01529 K14492 - gmx:100779833 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01529 2 28612055 28613667 Lapu2g01529 2 28612055 28613667 ECH