Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01528 ATGGTGTGGGACAAAATTGACCGTGGTTCTTTCAGGGTTGATGATGATCTTATGGAGGCTCTCTTCGGGTTAGTCCCCACCAACCGAAATGATAATGCCCCCAAAGAAAATAACTCGACGAGTTCTAGCAGGGATGTTTTGGCTCCATCATCAAATGCCTTCCTTCTTGACCCAAGAAAATCACAAAACATTGCTATTGTTTTGAAATCTCTGACAGTCTCTCGTAAAGAGATTATTGACGCACTCATTGATGGTCAAGGCCTTAACATAGAAACCATTGAAAAGCTTGGTAGAGTAGCCCCAACAGAAGAAGAGCAAGCACTTGTACTTGCATATGAAGGAGACCCTTCAAAACTTGCTGAAGCCGAATTTTTCCTACGTCACATCCTCAAAGCTGTTCCTTCAGCATTTAAGCGATTGAATGCCTTGCTATTCAGGTTGAATTATGACTCCGAGATTCTAGAAATCAAGGAGTTTCTGCAGACCCTTGAGATGGGGTGCAAGGAGCTTCGAAACCAAGGAATGTTTGTGAAACTTCTTGAAGCAGTGCTTAAGGCTGGAAATCGCATGAATGCAGGCACTCAGAGGGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTAAGAAAGCTCTCTGATGTCAAGAGCACTGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTTGTTCGTTCTGAAGGAAAACGTGCTGTTCTGAACCGTAATCATAGTCTGAGTCGTAGTAGCAGCAGGAACAGTAACAACAGTGGAGACTCTCAAAACTCTTCTGCTTCAAATGAACAAAGAAAAAGGGAATATATAACACTTGGATTGCCAGTTGTAGGAGGGATCAGTTCTGACTTTTCCAACGTGAAGAAAGCTGCGTTTACAGATTACAACAGTTTTGTTGGTTCAATCTCAGCGCTCTCGGCCAAGATTGTTGAGATTAGAGAACTTGTTTCCCAGTGTGGAAATGACAAGGGAGGGAACTTTGTGAGAGAAATGAACCGTTTTCTTGAAAATGCTGAGGAAGAATTGAGATTGGTGAGGGAAGAGCAAACAAGGGTAATGCAAATTGTGAAAAGAACAACAGATTATTATCAAGGAGGAGCTTCAAAAGATAGTGTAGACCACCCTCTTTATCTATTTGTCATAGTTAAGGATTTTCTGGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGTAACATGCAGAAGAGGAAGACACCTAAGGTAAATTAA 1245 0.4185 MVWDKIDRGSFRVDDDLMEALFGLVPTNRNDNAPKENNSTSSSRDVLAPSSNAFLLDPRKSQNIAIVLKSLTVSRKEIIDALIDGQGLNIETIEKLGRVAPTEEEQALVLAYEGDPSKLAEAEFFLRHILKAVPSAFKRLNALLFRLNYDSEILEIKEFLQTLEMGCKELRNQGMFVKLLEAVLKAGNRMNAGTQRGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRAVLNRNHSLSRSSSRNSNNSGDSQNSSASNEQRKREYITLGLPVVGGISSDFSNVKKAAFTDYNSFVGSISALSAKIVEIRELVSQCGNDKGGNFVREMNRFLENAEEELRLVREEQTRVMQIVKRTTDYYQGGASKDSVDHPLYLFVIVKDFLGMVDQACIEIARNMQKRKTPKVN* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01528 414 Pfam Formin Homology 2 Domain 1 394 IPR015425 -
Lapu2g01528 414 PANTHER FORMIN-RELATED 1 405 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lapu2g01528 414 Gene3D Formin, FH2 domain 1 413 IPR042201 -
Lapu2g01528 414 Coils Coil 333 360 - -
Lapu2g01528 414 MobiDBLite consensus disorder prediction 241 269 - -
Lapu2g01528 414 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 414 IPR015425 -
Lapu2g01528 414 SUPERFAMILY Formin homology 2 domain (FH2 domain) 53 409 - -
Lapu2g01528 414 SMART it6_source 1 409 IPR015425 -
Lapu2g01528 414 MobiDBLite consensus disorder prediction 30 46 - -
Lapu2g01528 414 MobiDBLite consensus disorder prediction 242 269 - -
Lapu2g01528 414 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01528 Lapu-Chr2 28593005 28595515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01528 1 409 FH2 protein (formin) Gene Family AT1G70140 56.585 7.79e-162 472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01528 2 28593005 28595515 Lapu2g01528 2 28593005 28595515 ECH