Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01503 ATGACTTCCTCCATCTCCATCTTCATCTTCCTCATTCTCCTCTTTCTCTCCTTCTTCAAACCCTCCCACACTCAACCATGTTCTTCCAACTCTCACACAAGCACAAGCACAAACTCTCACCCCTGTCCTCCCTTCTCCTCTAACCTCTCTTTCCCTTTCTCCTCCACACCAGGCTGTGGCCACCCCTCCTTCCACCTAACCTGCTCCACCCCCAATTCTTTCATCTCCATCAACAACCTCTCCTTCTCCATCCTCTCCTACAACCCCAACACCTCCTCCATAACCCTCTCCCCCCACCCTCACCCATCCCCTCACCCCAACTGCCCCTCCTTCCCCTCCATTCCCACACGCCCCATCAACCTCTCCGCCACCCCCTTTCGCGTCTCAGCAGCCACATGCTCCCGTCTCTCCTTCCTCCGCCCCTGCTCACCGCCTTCCCTCCCCAACTGCTCCCACTGCCCCTCCCAATGCCACCTCATCAAAAACCCCTCCCACCTCCTCCCTGACTGCAGATCCACCCATCACTCCCCTCAGTACTCAGAACCCGCCTGCCAGACCGACATCCTCGGCTTCCTCCAACAGTTCCTCCAAACTGGAATCCAACTCGACTGGGACCAAACCCGTGACCCCTACTTCACCAACTGCACCCTCTGCCGCGCCAGCAACGGCATCTGCGGCTTCAACTCCTCCTCCCAGAACAACCCGTTCCTCTGCTTCCGCTTCCGCTCCCAATCCACGCTATCCCCACCATGGATTCGCAAATTCAAACCCCACAAAATGGCCGTTTTCAGCACCATCATCGCCTTCACCTCCCTGCTCCTCTTAATATCAGTCGGCACCGCAATCCTTCGCTCCGCCAGGTCAAAGGCCTCTTCGGCCACGCAGCAAGACCCCACCACGGTATTCCTCCACCACCACCGCTCCGCCAGCCTCCTCCCCCCGGTCTTCACCTACGACGACCTCGCCGCCGCTACCCACAACTTCGATCCCAAGAGGAAAATCGGCGACGGCGGGTTTGGCTCGGTCTACCTCGCGCAGCTCCGTGACGGACGCCTCGCGGCGGTGAAGTACCTCCACCGCCACCACGCCTCTGCTGCGTTCTCTACTAAGTCTTTCTGTAACGAGATCCTCATTCTCTCCTCGATCCACCACGCGAACCTGGTGAAGCTCCACGGTTACTGCAGCGACCCGAGGGGGCTTCTCCTCGTCTACGATTACATCCCCAACGGAACCCTGGCAGAGCATTTGCACAACCGCAAAGGATCGCTGACGTGGCAGGTGAGACTCGAAATCGCGTTACAAACGGCGTTAGCAATGGAGTATCTTCACTTCTCGGTGGTTCCGCCGGTCGTCCACAGAGACATAACGTCGTCGAATATTTTCGTGGAGAGGGATATGAGGATAAAGGTGGGAGATTTCGGGTTGTCAAGGCTTTTGGTGGTGCAGGATACGACGTCGTCTTCGAACGGGTTTGTTTGGACCGGACCGCAAGGAACACCGGGGTATCTGGACCCAGATTACCACCGCTCGTTCCGCTTGACCGAGAAGAGTGACGTGTACAGTTTCGGAGTTGTGTTGTTGGAGCTTATCTCGGGAATGAAAGCGGTGGACCAGACCAGAGACAAGCGCGAAATGGCGCTTGCGGATTTGGTCGTTTCCAGGATCCAGATGGGGCAGCTCCACCAAGTTCTTGATCCAGTATTTAAACGCGGCGACGGCGACGGCGTCGCCGCCGTTGCGGAACTCGCGTTCCGGTGCGTGGCGGCGGATAAGGACGACCGGCCGGATTCAAAGGAGGTGGTGGAGGAGCTACGGCGGGTGCGGAATCGGACGGTGGCGGCGAAGGAGTGA 1851 0.5824 MTSSISIFIFLILLFLSFFKPSHTQPCSSNSHTSTSTNSHPCPPFSSNLSFPFSSTPGCGHPSFHLTCSTPNSFISINNLSFSILSYNPNTSSITLSPHPHPSPHPNCPSFPSIPTRPINLSATPFRVSAATCSRLSFLRPCSPPSLPNCSHCPSQCHLIKNPSHLLPDCRSTHHSPQYSEPACQTDILGFLQQFLQTGIQLDWDQTRDPYFTNCTLCRASNGICGFNSSSQNNPFLCFRFRSQSTLSPPWIRKFKPHKMAVFSTIIAFTSLLLLISVGTAILRSARSKASSATQQDPTTVFLHHHRSASLLPPVFTYDDLAAATHNFDPKRKIGDGGFGSVYLAQLRDGRLAAVKYLHRHHASAAFSTKSFCNEILILSSIHHANLVKLHGYCSDPRGLLLVYDYIPNGTLAEHLHNRKGSLTWQVRLEIALQTALAMEYLHFSVVPPVVHRDITSSNIFVERDMRIKVGDFGLSRLLVVQDTTSSSNGFVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGMKAVDQTRDKREMALADLVVSRIQMGQLHQVLDPVFKRGDGDGVAAVAELAFRCVAADKDDRPDSKEVVEELRRVRNRTVAAKE* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01503 616 SUPERFAMILY Protein kinase-like (PK-like) 314 608 IPR011009 -
Lapu2g01503 616 Gene3D Transferase(Phosphotransferase) domain 1 407 616 - -
Lapu2g01503 616 ProSiteProfiles Protein kinase domain profile. 328 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01503 616 ProSitePatterns Tyrosine protein kinases specific active-site signature. 450 462 IPR008266 GO:0004672|GO:0006468
Lapu2g01503 616 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 5 611 IPR044652 GO:0004672
Lapu2g01503 616 Pfam Protein tyrosine and serine/threonine kinase 331 604 IPR001245 GO:0004672|GO:0006468
Lapu2g01503 616 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Lapu2g01503 616 FunFam Putative serine/threonine-protein kinase At1g18390 family 304 406 - -
Lapu2g01503 616 CDD STKc_IRAK 334 604 - -
Lapu2g01503 616 FunFam LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.5 407 616 - -
Lapu2g01503 616 Gene3D Phosphorylase Kinase; domain 1 304 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01503 Lapu-Chr2 28223607 28225970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01503 42 616 Receptor kinase-like Gene Family AT1G69910 62.270 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lapu2g01503 PK_Tyr_Ser-Thr 4.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01503 - - gmx:100816739 942.954