LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu2g01485	ATGCTGATGGACCTGTGTGCCCAAATCCAGAGATCCTTCGACGACCGTTACACGCGCCACGCGCGCGACTCGCTCGACGAATTGCCTGATAGCTTTACCATCACCGACCCACACATCCCCGGCCACCCTATCGTCTTCGCGAGCCCGGGCTTCCTCAAGCTCACGGGCTACGCGCGCTGCGAGGTCCTGGGCCAGACCGCCGCCGTCTTTCAGGGCCCGCGCACTTCCCGGAGGTCCGTCATGGAAATCCGCGAGGCCGTCCGTGAGGAGCGCAACGCGGAGGTCGTTTTGCTCAACTACCGCAAGGATGGCACGCCGTTTTGGATGCTCTTCCGCGTCTGTCCCGTGTTCAGCGGCGACGGCGGCGCCGTCGTCCACTTCGTCGCCGTTCAGGTCCCGCTACACAAAAAGGATGGCTCCGGCGTCAGGGATTTCGGCTTCGGATGCTGTCGAAAGGAAGTGTGCTCTGATTCGTTATCGGAGCTTGGTCGCGTGTGTTCCGTGGAGCAAGTGCTGGAACGTGATGTCATTGAATTGGAGAGGGAAGAGCCGTGTGTGGCGAGTGATGAGGAGAAGCGAAGTGCTATTACTGCCACCGACAATATCTTCTCTGTGCTAACCCATTTTAGTGAGGCGACGGGCAGATTAGTGTGTAGGAAGAGGTGCAGCATTCCTGACGTGGGTCTTTTAAGCACATCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTAACTAATCCGCATTTACCGGACATGCCTATTGTTTATGTTAGTGATGCATTCTTGAAATTGACAGGTTATGGAAGAAATGAAGTTTTGGGTCGCAACTGTAGGTTTTTAGGTGGAACAGATACTGATACCTCTACTTTATATCTGATAAAGGAAAGCATTAAAGCTGAACAACCATGCACAGTACGTATTTTGAATTACAGGAAGGACGAAAGTTCATTTTGGAATTTTCTTCACATCTCACCCGTTCGTGATGCTTCCGGCAAGGTTGCATACTTTGTGGGAGTTCAAATAGAAGACAGCAATAAAAATGACGATAGCCAGTGTTTGAGTCCAGAGAAGAGGCAGCTTAGTGTGGTTGGTGTAGTAAAGGTTGCAGTGAGGAGTTTATCAATGACTGCGGGATCTTCCAAGTCGTAG	1158	0.513	MLMDLCAQIQRSFDDRYTRHARDSLDELPDSFTITDPHIPGHPIVFASPGFLKLTGYARCEVLGQTAAVFQGPRTSRRSVMEIREAVREERNAEVVLLNYRKDGTPFWMLFRVCPVFSGDGGAVVHFVAVQVPLHKKDGSGVRDFGFGCCRKEVCSDSLSELGRVCSVEQVLERDVIELEREEPCVASDEEKRSAITATDNIFSVLTHFSEATGRLVCRKRCSIPDVGLLSTSLIISLGRIKQSFVLTNPHLPDMPIVYVSDAFLKLTGYGRNEVLGRNCRFLGGTDTDTSTLYLIKESIKAEQPCTVRILNYRKDESSFWNFLHISPVRDASGKVAYFVGVQIEDSNKNDDSQCLSPEKRQLSVVGVVKVAVRSLSMTAGSSKS*	386

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu2g01485	385	NCBIfam	PAS domain S-box protein	257	342	IPR000014	-
	Lapu2g01485	385	NCBIfam	PAS domain S-box protein	43	125	IPR000014	-
	Lapu2g01485	385	SMART	pas_2	232	305	IPR000014	-
	Lapu2g01485	385	SMART	pas_2	19	88	IPR000014	-
	Lapu2g01485	385	FunFam	protein TWIN LOV 1	244	380	-	-
	Lapu2g01485	385	SUPERFAMILY	PYP-like sensor domain (PAS domain)	247	343	IPR035965	-
	Lapu2g01485	385	Gene3D	PAS domain	14	138	-	-
	Lapu2g01485	385	Pfam	PAS domain	244	343	IPR000014	-
	Lapu2g01485	385	Pfam	PAS domain	30	131	IPR000014	-
	Lapu2g01485	385	ProSiteProfiles	PAS repeat profile.	257	279	IPR000014	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu2g01485	Lapu-Chr2	27941073	27946211	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu2g01485	16	373	AGC Kinase Gene Family	AT5G58140	30.941	9.26e-60	206

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu2g01485	-		-	gmx:100785562	669.077

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