Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01483 ATGGGGTTAGGTGCAGAGAATGGTAAGGTGGTGGAGCCTTGGGATGTGTGTAAATCAAAGGGGAGGAAAAAGAAGAAAGGGGGCGAGGAAGTGGAAGGGTCTGGGTGTTGGCTTAGACTGAGGTTCTTTGGGAGCTGCATTTCTTCAAGATCCAAGGTCGATACCTCAGTCAGTGGCAGTGGCACAAGTACTCATTATGCTGAAAGTAAATCAACTAATGATACTAGTAGAGACCAACCAACAGCTCCAGCAGTCTCTTCTACAACCACTAGTAATGCAGAAAGCAATTCATCCACTTCTAAACTTGAAGAAGAGCTTAAAATTGCTTCCAGATTACGAAAGTTTTCTTTCAATGATCTTAAGTTAGCCACAAGAAATTTTCGGCCTGAGAGTTTTCTTGGTGAAGGCGGGTTTGGTTGTGTTTTCAAGGGGTGGATTGAAGAAAATGGAACTGCTCCGGTGAAACCTGGCACAGGGCTTACGGTTGCTGTAAAAACCCTCAACCATGATGGGCTCCAGGGTCATAAAGAGTGGCTGGCTGAAGTAAATTTTCTTGGTGACCTAGTTCATCCGAACCTTGTTAAACTTGTAGGTTACTGCATTGAAGATGATCAAAGGTTGCTAGTGTATGAGTTCATGCCTCGCGGTAGCCTAGAAAATCACTTATTTAGGAGATCCCTACCTCTTCCATGGTCCATTAGAATGAAAATTGCTCTAGGAGCTGCTAAGGGTCTTGCTTTTCTTCATGAAGAAGCTGAGCGACCAGTAATATATAGGGATTTTAAAACTTCAAATATACTATTAGATGCAGAGTACAATGCCAAGCTCTCAGACTTTGGTCTTGCCAAAGATGGTCCAGAAGGTGATAAAACCCATGTGTCCACTCGAGTGATGGGAACCTATGGTTATGCAGCACCAGAATATGTCATGACTGGTCATCTTACATCAAAAAGTGATGTGTACAGTTTTGGAGTGGTACTACTTGAGATGTTGACTGGCAGAAGATCCATGGACAAACACAGACCCAATGGTGAGCATAATCTTGTGGAATGGGCTCGGCCACATCTAGGAGAGAGGAGAAGGTTCTACAAGTTGATAGACCCTCGCTTGGAAGGCCACTTTTCAATAAAAGGAGCTCAGAAAGCTGCCCAACTGGCTGCTCACTGCCTTAGTAGAGATCCAAAAGCCAGGCCTCTAATGAGTGAAGTTTTAGAAGCTCTAAAGCCTTTGCCGAACCTCAAGGACATGGCGAGCTCTTCATATTATTTCCAGACAATGCAAGCTGATCGCTTTGGAGCCAGCCCCAACACAAGAAACGGACGAACACCAGGAGCATTGCTCACCCGCAATGGACAGCAGCAAAGGAGCCTTTCAATACCAAATGGTACCTATGCGTCTCCATATCACCATCAGATTCCTCAACCATCACCAAAACCCAATGGCAAAGCATAG 1452 0.4483 MGLGAENGKVVEPWDVCKSKGRKKKKGGEEVEGSGCWLRLRFFGSCISSRSKVDTSVSGSGTSTHYAESKSTNDTSRDQPTAPAVSSTTTSNAESNSSTSKLEEELKIASRLRKFSFNDLKLATRNFRPESFLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPHLGERRRFYKLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVLEALKPLPNLKDMASSSYYFQTMQADRFGASPNTRNGRTPGALLTRNGQQQRSLSIPNGTYASPYHHQIPQPSPKPNGKA* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01483 483 FunFam Serine/threonine-protein kinase BIK1 94 212 - -
Lapu2g01483 483 SUPERFAMILY Protein kinase-like (PK-like) 105 407 IPR011009 -
Lapu2g01483 483 Gene3D Transferase(Phosphotransferase) domain 1 213 428 - -
Lapu2g01483 483 Gene3D Phosphorylase Kinase; domain 1 86 212 - -
Lapu2g01483 483 MobiDBLite consensus disorder prediction 51 99 - -
Lapu2g01483 483 ProSitePatterns Protein kinases ATP-binding region signature. 133 165 IPR017441 GO:0005524
Lapu2g01483 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Lapu2g01483 483 MobiDBLite consensus disorder prediction 432 483 - -
Lapu2g01483 483 MobiDBLite consensus disorder prediction 13 31 - -
Lapu2g01483 483 MobiDBLite consensus disorder prediction 1 31 - -
Lapu2g01483 483 MobiDBLite consensus disorder prediction 432 470 - -
Lapu2g01483 483 Pfam Protein tyrosine and serine/threonine kinase 132 407 IPR001245 GO:0004672|GO:0006468
Lapu2g01483 483 MobiDBLite consensus disorder prediction 51 100 - -
Lapu2g01483 483 PANTHER OS01G0588500 PROTEIN-RELATED 90 410 - -
Lapu2g01483 483 ProSiteProfiles Protein kinase domain profile. 127 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01483 483 FunFam Probable serine/threonine-protein kinase PBL8 213 428 - -
Lapu2g01483 483 CDD STKc_IRAK 133 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01483 Lapu-Chr2 27905782 27909651 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01483 74 407 Glycoside Hydrolase AT3G07070 53.550 1.99e-117 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lapu2g01483 PK_Tyr_Ser-Thr 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01483 - - gmx:100305443 889.026