Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01470 ATGAAGAGTTTCTTGGTTTCTTTGTATCACATGTTTCCTGCAATCATTACTATCCTTCTAGTGCTGCTTACTCCAATTCCTAGTGCACAATTAACAACAAGTGAGAACAGAATTCTTCTCCAAGTTCAGAAGCTTCTTGAATATCCTCAAGTTCTTCAAGGATGGACCAACTTGACCAATTTCTGCTCCCTCCCTCCCTCACCTTCTCTCAACATCGTATGCTCCAATGGCCATACTCTCTCAAGAAGATTCTCCATTGAATCTTTCTTTACTGTCTTGACAAAGCTCTCAAATCTGAAGGTGTTGTCATTGGTGTCACTTGGTTTGTGGGGTCCTTTACCTTCCAAGATTAATAGGTTCTGGTTTCTTGAAGTGCTGAACGTAAGCTCGAACTTCATCTATGGGGAAATCACACCATCAGTCTCCTCTTTGAAAAATCTAAGGAGTCTGGTTTTGGCCGATAATCTTTTCAATGGGAGTGCTCCTGATCTTGAAAGACTGGCTTCTCTTGAAGAGCTCAAGTTGGGTGGCAACAAACTGGGTCCTGAATTCCCTTCATTGAACAAGAATCTCGTGAGGGTTATCTTGAGAAACAACTCTTTGAGATGTAGAATCCCTCCCCAACTCATGCATGTTTATAAACTTCAGCTATTTGACATCTCTTCCAATGCAATATTTGGAAATGTCCCATCATTTATTTTCTCTCTTTCTTTCCTCACGTACCTAAACTTGGCTGCAAACCAATTGAGTGGTTCCCTTTCTGTTAATTTGTCATGCAGTTCTGCTCTAACATTTGTTGATATCTCTCACAACCTATTGGTGGGAACATTGCCATCATGTATTGGTTCGAAGGCTTTAAACCGAACAACACGTTCTTCTGGGAATTGTTTGACAACTAGAAGCTTAATTGATCAATATCCATATTCTCATTGCCAGAAGAAAGTGGAGGCCTTAGCTGTTAAACCTTCACCTAGAAGGCAGAAGAGGGAATCAGAGATGCAATTAGACGTAAAACTTGGAATTATTTTTGTGGGAATTGCAGGGCTTCTTCTGGTTCTTTTCATTCCGTGTATCTTCAGAAAGTTCAAAGCAGACATCAATTATAAAATAGATATCTCGGCTCCTGATGTGCGTGCAAATCCAAGATCAAATACTGATGCAAGTGTTCCTCTAGCTATGCGGCAACCTTTTCTTGGATTCCCACCGTACTACATATTTTCATTAAAAGAAATTGAAGATGCTACAAATAACTTTGATCAATCAAATCTAATAGCAGAAGGATCACAAGGACAGCTATATAATGGCTGGCTCATAAATGGTTCAATGGTTATGGTCAATCGTGTAAGACCAAAGCAGAAGTGTTTGCAAAAGAATAGTATTGAGAGCTTGAAGGTATTACCCTATTTAAGGTATGGGCATTTGGTGAGTATTTTAGGACACTGTGTCACTACTCAACGGGATCGTCCCCAAATGATAAGCACAATATTCATTGTATTTGAACATGTCTCAAACGTGTCATTGAAGGATTACCTTGCAGACAGGAGAAAAAAGGAAATGTTGAAATGGCCACAAAGAATGGCAATCTGCATAGGCATTGCAAGAGGAATCCAGTTCTTACACACCAGAGTTCGTCCTGCCATATTTGGCAACAATATAAAGATTGAGAATATTCTGTTGGATGATACCCTCCATGCAAAAGTTAGTGGATACAGCATTCCATGGCCATCCAAGAAAAGTCTTCACAGAAAACTTTGTGACCAAAGAGCCCTCAATCAAATTGGCAGCAACAATAAGGCAGAAAAGGAAGATATATATCAGTTTGGTGTTATTCTACTTGTAGTTATCACTGGAAAACTAATTACATCTTCCAGTGAAGTACAGGAGCTGAAGGATGAGCTGGAGAAAGGTTTAGTAGAAGCTGCATCACCATCACTAAGCGGTGCATCACCAATACTAAGGGGCGTCTCCGATTTTTCCATCAGGGAGACTTGTGATCCCAGTAACCGCCCTTCAATAGAGGATATTCTCTGGAATTTGCAGTACTCCATGCAAGTTCAAGAGCCAAGGATCAGTTCTGTAAACCTCTTTATAAATGTATAA 2100 0.4 MKSFLVSLYHMFPAIITILLVLLTPIPSAQLTTSENRILLQVQKLLEYPQVLQGWTNLTNFCSLPPSPSLNIVCSNGHTLSRRFSIESFFTVLTKLSNLKVLSLVSLGLWGPLPSKINRFWFLEVLNVSSNFIYGEITPSVSSLKNLRSLVLADNLFNGSAPDLERLASLEELKLGGNKLGPEFPSLNKNLVRVILRNNSLRCRIPPQLMHVYKLQLFDISSNAIFGNVPSFIFSLSFLTYLNLAANQLSGSLSVNLSCSSALTFVDISHNLLVGTLPSCIGSKALNRTTRSSGNCLTTRSLIDQYPYSHCQKKVEALAVKPSPRRQKRESEMQLDVKLGIIFVGIAGLLLVLFIPCIFRKFKADINYKIDISAPDVRANPRSNTDASVPLAMRQPFLGFPPYYIFSLKEIEDATNNFDQSNLIAEGSQGQLYNGWLINGSMVMVNRVRPKQKCLQKNSIESLKVLPYLRYGHLVSILGHCVTTQRDRPQMISTIFIVFEHVSNVSLKDYLADRRKKEMLKWPQRMAICIGIARGIQFLHTRVRPAIFGNNIKIENILLDDTLHAKVSGYSIPWPSKKSLHRKLCDQRALNQIGSNNKAEKEDIYQFGVILLVVITGKLITSSSEVQELKDELEKGLVEAASPSLSGASPILRGVSDFSIRETCDPSNRPSIEDILWNLQYSMQVQEPRISSVNLFINV* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01470 699 SUPERFAMILY L domain-like 63 283 - -
Lapu2g01470 699 Gene3D Phosphorylase Kinase; domain 1 392 489 - -
Lapu2g01470 699 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 80 302 - -
Lapu2g01470 699 SUPERFAMILY Protein kinase-like (PK-like) 396 679 IPR011009 -
Lapu2g01470 699 ProSiteProfiles Protein kinase domain profile. 418 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01470 699 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 32 189 - -
Lapu2g01470 699 Pfam Protein tyrosine and serine/threonine kinase 422 636 IPR001245 GO:0004672|GO:0006468
Lapu2g01470 699 Gene3D Ribonuclease Inhibitor 32 189 IPR032675 -
Lapu2g01470 699 Gene3D Ribonuclease Inhibitor 190 316 IPR032675 -
Lapu2g01470 699 Gene3D Transferase(Phosphotransferase) domain 1 503 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01470 Lapu-Chr2 27792742 27796743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01470 29 630 Miscellaneous Gene Families AT2G02780 46.250 1.69e-159 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lapu2g01470 PK_Tyr_Ser-Thr 6.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01470 - - gmx:100800018 1019.22