Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01469 ATGGGAAAAGGAAGAAGTCCTGGCAAATGGTTCAAGAACTTACTCTTGGGGAAGAAATCGTCGTCAAAATCTACTTCATCGAAGAAGAATGATATTTTTAAACCTTCAAGTAATAAGGATGTGGTGGTGTCTTCTGAGGTACCTGTGTCTGATTCACCTGTCAATTCTCTGGTGATATCCCCGCCGATATCTGGAGCTAATAATACTAAAGGAGTGCTTTCAGAAAAGGAGGTAGTTAGTAGATCATCACATGATAAGGATGTTCTTTCAACTAGAGATGAAGAGGTTAAGGTGCAGGATGTTGCTAATTTTGGATCTCAAGAGGATCCTGAGAAACTTAAGCTTACAGAAGCAGCTATAAAAGTTCAGGCCGCTTGTAGAAGCTATCTGGCTCGTCAAACATTTCGAACACTCAAAGGTGCCATACAACTACAAGCTCTCATTCGTGGTCACTTGGTTAGAAGACAAGCTGTTTCTGCTTTATACTGTGTGAAGGGAATAGTTAAATTTCAAGCATTGGCTCGTGGCTACAATGTTAGACGTTCTGATATAGGGAATGCTGTCCAGAAAACTTGTAAGGACACACATTATTCAAATTCTATTTCGGTAGTTTCATCCACACAGGAAGAGAAGCTGTCAGAAAATGTCTTTGTTTGCAAGCTTCTGGCTTCATCCCCATATGCAGTTCCTCTATCACTCACCAGTGATCCAGGAGAACCTAACATGGCTTGGAAGTGGCTTTACTATTGGACACAGTCACACTTTTGGGCACCTCTTCCTGAATTGAAAAAGAAAGTTGACTCTGTGTCTAATGAGAGAAGTGGCAATTCTCTGACAGTTCAAAAGGGACAAGTTAAAAGAAATACTCGAAAATCTCCTGCTGTGAAAGCTGACAATGACTTGGTTTTAGGTGCTAGCAAATCTAAACAGCGTTCTAAAAAGGATTCAAACCATCCATTGCCTTCAGCTCAGGAACACCCACAAAAGGAAACTGGGAAAAGTAGTCTTGAAAAAAAACATGCGCACAATGTTTCGAATGGATCTGAGGTTGTTAATGAAAAAAGAAAACACAGCAGTAGAAAGATTTTAGATCATACTGTCACTGATGTTTTAGAGAAGGGCCCAAATGCCTCTTCTGAGAAAATGGAAGATTTGACAGTGGCAAAGTCAGAAGAGTCTGATCCTGAGAAGGGTCATGGACAGCCAGCAAAAGATGAGAATGATAATGAGCCACATAATGATCCTATTGCCATTTCAAAGACTACCGTGAAGAAGGTTGAAAATGAAAAAATTCAAGAAGTCGGTGAGGATCTGAATGGTGGTGGTGATAATTGTATCAGTAACAATTGCCAGAGAAGAGCTTCACTACCTGCGAACTTTAATGATCAAGACAATGAGTTGTATACCACTCCTGTTACTCCAAGACTGCCAAGTTATATGGCTCCTACCGAATCTGCAAAGGCTAAGCTAAGAGGACAAAGCTCCCCAAGATTTGCTACTGATTTGGTAGAGAAAAGCAGTACAACCAGGCGGCATTCACTTTCATCCTCACTTAATGGCAGGTCAGGTTCATTTTCCCCGAGAGCTGAAAGGCTGATGGCCGTGAGTGGCAGAGGAGTGATAAGGTCTGATAGATCTCTGTCCTCTTCAAGGGATGGAACTGAGAAGTTGATCCAACCTCAGTGGAGAAGGTGA 1695 0.4159 MGKGRSPGKWFKNLLLGKKSSSKSTSSKKNDIFKPSSNKDVVVSSEVPVSDSPVNSLVISPPISGANNTKGVLSEKEVVSRSSHDKDVLSTRDEEVKVQDVANFGSQEDPEKLKLTEAAIKVQAACRSYLARQTFRTLKGAIQLQALIRGHLVRRQAVSALYCVKGIVKFQALARGYNVRRSDIGNAVQKTCKDTHYSNSISVVSSTQEEKLSENVFVCKLLASSPYAVPLSLTSDPGEPNMAWKWLYYWTQSHFWAPLPELKKKVDSVSNERSGNSLTVQKGQVKRNTRKSPAVKADNDLVLGASKSKQRSKKDSNHPLPSAQEHPQKETGKSSLEKKHAHNVSNGSEVVNEKRKHSSRKILDHTVTDVLEKGPNASSEKMEDLTVAKSEESDPEKGHGQPAKDENDNEPHNDPIAISKTTVKKVENEKIQEVGEDLNGGGDNCISNNCQRRASLPANFNDQDNELYTTPVTPRLPSYMAPTESAKAKLRGQSSPRFATDLVEKSSTTRRHSLSSSLNGRSGSFSPRAERLMAVSGRGVIRSDRSLSSSRDGTEKLIQPQWRR* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01469 564 MobiDBLite consensus disorder prediction 330 368 - -
Lapu2g01469 564 MobiDBLite consensus disorder prediction 268 428 - -
Lapu2g01469 564 Pfam IQ calmodulin-binding motif 165 181 IPR000048 GO:0005515
Lapu2g01469 564 Pfam IQ calmodulin-binding motif 139 156 IPR000048 GO:0005515
Lapu2g01469 564 Pfam IQ calmodulin-binding motif 116 136 IPR000048 GO:0005515
Lapu2g01469 564 MobiDBLite consensus disorder prediction 1 52 - -
Lapu2g01469 564 MobiDBLite consensus disorder prediction 271 288 - -
Lapu2g01469 564 PANTHER IQ-DOMAIN 5-RELATED 1 521 - -
Lapu2g01469 564 MobiDBLite consensus disorder prediction 490 564 - -
Lapu2g01469 564 Pfam Protein of unknown function (DUF4005) 463 543 IPR025064 -
Lapu2g01469 564 Gene3D - 113 162 - -
Lapu2g01469 564 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Lapu2g01469 564 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Lapu2g01469 564 SMART iq_5 114 136 IPR000048 GO:0005515
Lapu2g01469 564 SMART iq_5 137 158 IPR000048 GO:0005515
Lapu2g01469 564 SMART iq_5 162 184 IPR000048 GO:0005515
Lapu2g01469 564 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 181 IPR027417 -
Lapu2g01469 564 MobiDBLite consensus disorder prediction 542 556 - -
Lapu2g01469 564 MobiDBLite consensus disorder prediction 17 52 - -
Lapu2g01469 564 MobiDBLite consensus disorder prediction 499 524 - -
Lapu2g01469 564 MobiDBLite consensus disorder prediction 376 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01469 Lapu-Chr2 27775127 27780870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01469 4 564 IQD Protein Family AT1G14380 35.505 2.06e-79 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01469 - - gmx:100800548 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01469 2 27775127 27780870 Lapu2g01469 2 27775127 27780870 ECH
Lapu2g01469 2 27775127 27780870 Lapu9g00665 9 7926801 7934648 ECH