Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01468 ATGAGTGAACTTCTTTTTGATGATATTTTCAAGGTTGAAGATGTAGACCCTGATGGTAAAAAGTATGACAAGGCATTGGAAGACCGAGTTGATAAGATGTCTGAGGAGGATAACATGCTAATTGGTGGGGCAACAACTAAGTTTGTTGATTGTACTGATGCATTTAACACTGTAGAGGTTTTTCCTTCTCGAGATGCAATGTTAAATTGGGCTCGAGATGTTGCAAAAGAGAATGGTTTTGTCCTTATTATTTTGAGATCAGAGACATCTACGAAACCTACAAGAACTACAAGACGTAATCAAAGGAAGACATTTGTAATTTTGGGTTGCGATAGAAGTGGAAAATATAGGGGACCATACAAGAATGCATTATCCAGAAAGGTAAATGGTTCTAGAAAATGTGAGTGTCCCTTCAGGTTAAGGGGTAAAGCTTTGAAAAAGGCTGAAGGATGGATTGTTAAGGTAATGTGTGGTTGTCACAACCATGACTTGGAGGAAACATTAGTGGGTCATCCATATGCAGGTCGGTTGAGTGCTGAAGAGAAGTCTTTGGTTGATGATATGACAAAGAACATGATGAAGCCAAAAGATATACTATTGACATTGAAAGATTATAACATGGATAATGTCACTACTATCAAGCAGATTTACAATGCCCGACAGGCTTATCGATCCTCTCAAAAAGGTTTAGAAATGCAATACCTATTGAAATTATTGGAAAGTGAGCGGTATGTGTACTGGCATAGAAAGGTGGATGATTCCAATGCTATCAGAGATATATTCTGGACACATCCAGATGCCATTAAACTTCTAGGTGCTTTCAACACTGTCTTGATAATTGGTAGTATTTATACAACCACTAGGTATCCATTGCCATTGCTTGAGATTGTTGGCGTTACTTCAACAGAGTTGACATTCTCTGTGGCATTTGCTTTTGTGGAGTCGGAGGGAGCTGACAACTTCATTTGGGTACTACAAAAGTTAAGGGGATTGATTGTTAAAGATGAAGACATACCTCAAGTGATTGTGACTGATAGAGACATTTCTTTGATGAATGCAGTACAAGTTGTCTTTCCGAGCTCTTCTAATTTGTTATGTCAGTTTCATATCGACAAGAATGTGAAGGCCAAATGCATGTCAATAGTTCATCCAAAGGAGAAACAAGACTTGGTGATGGATGCATGGGATGTTGTTGTGAATTCTTCTAGTGAGAGTGAATATATGCAGCGTCTGACATTATTTGAAAAAGTTTGCTCAGGTTTTCCTAGTTTTGGTGAATATGTGAAAAATATGTGGCTGATTCCACACAAGGAAAAGTTTGTCACTTCATGGACAAATCAGGTGATGCATTTGGGTAACACAACAACCAATAGGGTTGAGGTAACAAATTGTAACTTAAGGAATTTGCTTCAAGATAGCAAGGAAGATATGTGCAGTTATTGGGATGCTATGAATGATATGATTACTTTGCAACACAGAGAGATTAAGTCGTCATTTGAGAAAAGCATAAATGTAGTGGATCATATGCATAATACTCCATTATACATCAAACTGCTAGGATTTGTATCAAGAAGTGCATTGAGTCATATAACTGATGAGTATGATCGGGTTAAGACTGCTGGTATTGATATTTCTAAATGTTGTTGCATAGTTAGAACTACACACGGTCTTCCTTGTGCATGTGAACTTGCTAGGTACAGTACAATGTGTCATCCTATTCCCTTGGAGGCAATTCACGTTCATTGGAGGAAGTTAAACGTTATTGACCGAGGAATGAATGACAAGGAGTCTGAGTTATCATTGCAACCTGAATTGGATGCTTTGCTCAAGCGATTTCAGGAACTTGATTGTGCTGGGAAAATTATTCTAAAGGCTAAATTGCATGAACTAGCATTTCCAGATACAGCTTCAAAGTGTCCAACTCCCAAAGAGTTAAAAATAAAGGGTGCTCTAAGGTCAAAAAGAGATAGACCAATTCCTTATGATCTTTCACATCGGGAGCATGCTGATGCAATGCGTCCTACCCATAGTGGCACTTCATCTCATCAACTAGTCCATGAGTCAAAACGAAGAAGAATTCTGCCAATGATGGATCAATTTCCGATTCAGATCCATCCATTTATTGAAGAAATTATCGATGTGAAAGCAGACTCAAATTGTGGTTATCGTGTTGTTGCAGCTCAACTTGGTATGGGTGAGGAATCATGGGCTTTAGTTCGTCAGGACTTGATTAGAGAGCTTCAGCAGTGGCAAGATATTTACGGCAAACTCTTTGGTAGCAATGATCGAGTGGCTGAATTGAAGCAATCTTTGTATGTTGACAAGGAGACATCTAGTAAAAAGTGGATGACCATACCAGATATGGGTTATGTAATTGCCTCAAGATATAACGTGGTTCTAGTCACTTTATCCTTGAAGGAGTCCATGACATTTTTCCCTCTTAGAGGACGACCACCATTATCTCAGTCAAGGCACCGCCTTATTACCATTGGGTTGGTGCATGATTGTCACTTTGTACGGGTTGTTTTGAAGGATGAGTCAGCATTACCTCCAACTGCTTTGCAGTGGTCGAGATACTGCAATGCTGAATCCCGTTCTTGGGAAACTTCATATGTTAATCGTATGGAACATTTTAGGTCATTGTTTCCACAAAAGAAACATGATGATGTAAATTTTATTGAGGATTAA 2688 0.3869 MSELLFDDIFKVEDVDPDGKKYDKALEDRVDKMSEEDNMLIGGATTKFVDCTDAFNTVEVFPSRDAMLNWARDVAKENGFVLIILRSETSTKPTRTTRRNQRKTFVILGCDRSGKYRGPYKNALSRKVNGSRKCECPFRLRGKALKKAEGWIVKVMCGCHNHDLEETLVGHPYAGRLSAEEKSLVDDMTKNMMKPKDILLTLKDYNMDNVTTIKQIYNARQAYRSSQKGLEMQYLLKLLESERYVYWHRKVDDSNAIRDIFWTHPDAIKLLGAFNTVLIIGSIYTTTRYPLPLLEIVGVTSTELTFSVAFAFVESEGADNFIWVLQKLRGLIVKDEDIPQVIVTDRDISLMNAVQVVFPSSSNLLCQFHIDKNVKAKCMSIVHPKEKQDLVMDAWDVVVNSSSESEYMQRLTLFEKVCSGFPSFGEYVKNMWLIPHKEKFVTSWTNQVMHLGNTTTNRVEVTNCNLRNLLQDSKEDMCSYWDAMNDMITLQHREIKSSFEKSINVVDHMHNTPLYIKLLGFVSRSALSHITDEYDRVKTAGIDISKCCCIVRTTHGLPCACELARYSTMCHPIPLEAIHVHWRKLNVIDRGMNDKESELSLQPELDALLKRFQELDCAGKIILKAKLHELAFPDTASKCPTPKELKIKGALRSKRDRPIPYDLSHREHADAMRPTHSGTSSHQLVHESKRRRILPMMDQFPIQIHPFIEEIIDVKADSNCGYRVVAAQLGMGEESWALVRQDLIRELQQWQDIYGKLFGSNDRVAELKQSLYVDKETSSKKWMTIPDMGYVIASRYNVVLVTLSLKESMTFFPLRGRPPLSQSRHRLITIGLVHDCHFVRVVLKDESALPPTALQWSRYCNAESRSWETSYVNRMEHFRSLFPQKKHDDVNFIED* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01468 895 Pfam MULE transposase domain 278 373 IPR018289 -
Lapu2g01468 895 ProSiteProfiles OTU domain profile. 709 844 IPR003323 -
Lapu2g01468 895 CDD OTU 710 838 - -
Lapu2g01468 895 PANTHER SWIM-TYPE DOMAIN-CONTAINING PROTEIN 59 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01468 Lapu-Chr2 27758042 27773027 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lapu2g01468 MULE 2.2e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01468 - - gmx:100805365 1411.36